Package org.intermine.bio.web.model

Class ProteinAtlasExpressions.ExpressionList

java.lang.Object

org.intermine.bio.web.model.ProteinAtlasExpressions.ExpressionList

Enclosing class:

ProteinAtlasExpressions

public class ProteinAtlasExpressions.ExpressionList
extends java.lang.Object

Represents a treemap structure of maps of expressions

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
class	ProteinAtlasExpressions.ExpressionList.StainingLevel	Gives us 'stats' on the overall staining level of the Expressions

Constructor Summary

Constructors

Constructor	Description
ExpressionList(java.util.Comparator<java.lang.String> comparator)	Constructor

Method Summary

Modifier and Type	Method	Description
void	add(java.util.Map<java.lang.String,java.lang.String> resultRow)	Put/add to the map of expressions
java.lang.String	getOrganName()
ProteinAtlasExpressions.ExpressionList.StainingLevel	getStainingLevel()
java.util.Map<java.lang.String,java.util.Map<java.lang.String,java.lang.String>>	getValues()	Get the internal map of expressions
void	setOrganName(java.lang.String string)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExpressionList

public ExpressionList(java.util.Comparator<java.lang.String> comparator)

Constructor

Parameters:

comparator - object used to compare

Method Detail

add

public void add(java.util.Map<java.lang.String,java.lang.String> resultRow)

Put/add to the map of expressions

Parameters:

resultRow - results row

getValues

public java.util.Map<java.lang.String,java.util.Map<java.lang.String,java.lang.String>> getValues()

Get the internal map of expressions

Returns:

the internal map of expressions

setOrganName

public void setOrganName(java.lang.String string)

Parameters:

string - name of organ

getOrganName

public java.lang.String getOrganName()

Returns:

name of organ

getStainingLevel

public ProteinAtlasExpressions.ExpressionList.StainingLevel getStainingLevel()

Returns:

staining level