Package org.intermine.bio.webservice

Class GenomicRegionGFF3Service

    • Field Summary

      • Fields inherited from class org.intermine.webservice.server.lists.ListMakerService

        LIST_TYPE_KEY

      • Fields inherited from class org.intermine.webservice.server.lists.AbstractListService

        LIST_DESCRIPTION_KEY, LIST_ID_KEY, LIST_NAME_KEY, LIST_SIZE_KEY

      • Fields inherited from class org.intermine.webservice.server.core.JSONService

        bagManager, model

      • Fields inherited from class org.intermine.webservice.server.WebService

        dataPackageOutput, DEFAULT_CALLBACK, im, out, output, request, response, webProperties

    • Constructor Summary

      Constructors 
      Constructor Description
      GenomicRegionGFF3Service​(org.intermine.api.InterMineAPI im)
      Constructor.

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      protected void checkPathQuery​(org.intermine.pathquery.PathQuery pq)
      No-op stub.
      protected java.lang.String getContentType()  
      protected GFF3Exporter getExporter​(org.intermine.pathquery.PathQuery pq)  
      protected java.lang.String getSuffix()  

      • Methods inherited from class org.intermine.webservice.server.lists.ListMakerService

        canServe, execute, initialiseDelendumAccumulator

      • Methods inherited from class org.intermine.webservice.server.lists.AbstractListService

        getClassesForBags

      • Methods inherited from class org.intermine.webservice.server.core.JSONService

        addOutputInfo, addResultEntries, addResultEntries, addResultEntry, addResultEntry, addResultItem, addResultItem, addResultValue, addResultValue, addResultValue, getResultsKey, lazyList, postInit

      • Methods inherited from class org.intermine.webservice.server.WebService

        cleanUp, formatIsFlatFile, formatIsJSON, formatIsJSONP, formatIsXML, getAuthenticatedUser, getCallback, getColumnHeaderStyle, getDefaultOutput, getExtension, getFormat, getIntParameter, getIntParameter, getLineBreak, getListManager, getOptionalParameter, getOptionalParameter, getPermission, getProperty, getRawOutput, getRequestFileName, getRequiredParameter, hasCallback, initState, isGzip, isUncompressed, isZip, makeJSONOutput, makeXMLOutput, service, setFormat, setNameSpace, wantsColumnHeaders, wantsDataPackage

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • GenomicRegionGFF3Service

        public GenomicRegionGFF3Service​(org.intermine.api.InterMineAPI im)
        Constructor.
        Parameters:
        im - A reference to an InterMine API settings bundle.