Class GeneModelSettings


  • public class GeneModelSettings
    extends java.lang.Object
    • Constructor Detail

      • GeneModelSettings

        public GeneModelSettings​(java.lang.String organism)
        Parameters:
        organism - organism
    • Method Detail

      • getOrganism

        public java.lang.String getOrganism()
        Returns:
        the organism
      • getHasGenes

        public boolean getHasGenes()
        Returns:
        true if has genes
      • getHasTranscripts

        public boolean getHasTranscripts()
        Returns:
        true if has transcripts
      • getHasThreePrimeUTRs

        public boolean getHasThreePrimeUTRs()
        Returns:
        true if has three ' UTRs
      • getHasFivePrimeUTRs

        public boolean getHasFivePrimeUTRs()
        Returns:
        true if has five ' UTRs
      • getHasExons

        public boolean getHasExons()
        Returns:
        true if has exon
      • getHasIntrons

        public boolean getHasIntrons()
        Returns:
        true if has intron
      • getHasCDSs

        public boolean getHasCDSs()
        Returns:
        true if has CDS