| Modifier and Type | Method and Description |
|---|---|
protected void |
CommitteeBatchCorrespondenceServiceImpl.applyFinalAction(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence) |
protected ProtocolActionBase |
CommitteeBatchCorrespondenceServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
| Modifier and Type | Method and Description |
|---|---|
List<ProtocolBase> |
CommitteeScheduleBase.getProtocols() |
| Modifier and Type | Method and Description |
|---|---|
void |
CommitteeScheduleBase.setProtocols(List<ProtocolBase> protocols) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolMeetingVoterBase.getProtocol() |
ProtocolBase |
CommitteeScheduleMinuteBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
List<ProtocolBase> |
CommitteeScheduleMinuteBase.getProtocols() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolMeetingVoterBase.setProtocol(ProtocolBase protocol) |
void |
CommitteeScheduleMinuteBase.setProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
void |
CommitteeScheduleMinuteBase.setProtocols(List<ProtocolBase> protocols) |
| Modifier and Type | Field and Description |
|---|---|
protected ProtocolDao<? extends ProtocolBase> |
CommitteeBatchCorrespondenceServiceImplBase.protocolDao |
| Modifier and Type | Method and Description |
|---|---|
ProtocolDao<? extends ProtocolBase> |
CommitteeBatchCorrespondenceServiceImplBase.getProtocolDao() |
| Modifier and Type | Method and Description |
|---|---|
protected abstract void |
CommitteeBatchCorrespondenceServiceImplBase.applyFinalAction(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence) |
protected boolean |
CommitteeBatchCorrespondenceServiceImplBase.correspondencePreviouslyGenerated(ProtocolBase protocol,
ProtocolCorrespondenceTypeBase protocolCorrespondenceType)
This method determines if the notification for the protocol has already been generated.
|
protected ProtocolActionBase |
CommitteeBatchCorrespondenceServiceImplBase.createAndSaveProtocolAction(ProtocolBase protocol,
ProtocolCorrespondenceTypeBase protocolCorrespondenceType,
String protocolActionTypeCode)
This method creates the ProtocolActionBase business object and persists it to the database.
|
protected ProtocolCorrespondence |
CommitteeBatchCorrespondenceServiceImplBase.createAndSaveProtocolCorrespondence(String committeeId,
ProtocolBase protocol,
ProtocolCorrespondenceTypeBase protocolCorrespondenceType,
ProtocolActionBase protocolAction)
This method creates the ProtocolCorrespondence business object and persists it to the database.
|
protected CommitteeBatchCorrespondenceDetailBase |
CommitteeBatchCorrespondenceServiceImplBase.createBatchCorrespondenceDetail(String committeeId,
ProtocolBase protocol,
ProtocolCorrespondenceTypeBase protocolCorrespondenceType,
String committeeBatchCorrespondenceId,
String protocolActionTypeCode)
This method creates the CommitteeBatchCorrespondenceDetailBase and all associated business objects.
|
protected ProtocolCorrespondenceTypeBase |
CommitteeBatchCorrespondenceServiceImplBase.getAfterProtocolCorrespondenceTypeToGenerate(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence)
This method assists with determining what ProtocolCorrespondenceTypeBase is applicable to be generated at this time for
correspondences that are to be send after the event.
|
protected ProtocolCorrespondenceTypeBase |
CommitteeBatchCorrespondenceServiceImplBase.getBeforeProtocolCorrespondenceTypeToGenerate(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence)
This method assists with determining what ProtocolCorrespondenceTypeBase is applicable to be generated at this time for
correspondences that are to be send before the event.
|
protected abstract ProtocolActionBase |
CommitteeBatchCorrespondenceServiceImplBase.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
protected ProtocolCorrespondenceTypeBase |
CommitteeBatchCorrespondenceServiceImplBase.getProtocolCorrespondenceTypeToGenerate(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence)
This method determines if and for which ProtocolCorrespondenceTypeBase a batch correspondence needs to be generated.
|
| Modifier and Type | Method and Description |
|---|---|
void |
CommitteeBatchCorrespondenceServiceImplBase.setProtocolDao(ProtocolDao<? extends ProtocolBase> protocolDao) |
| Modifier and Type | Class and Description |
|---|---|
class |
IacucProtocol
This class is ProtocolBase Business Object.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
IacucProtocolVersionServiceImpl.createProtocolNewVersionHook(ProtocolBase protocol) |
protected ProtocolBase |
IacucJavaFunctionKrmsTermServiceImpl.getActiveProtocol(String protocolNumber) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
IacucProtocolVersionServiceImpl.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
IacucProtocolFinderDaoOjb.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
IacucProtocolDocument.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
IacucProtocolDaoOjb.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
IacucProtocolLookupableHelperServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolTaskBase |
IacucProtocolAction.createNewModifyProtocolTaskInstanceHook(ProtocolBase protocol) |
protected ProtocolTaskBase |
IacucProtocolLookupableHelperServiceImpl.createNewProtocolTaskInstanceHook(String taskName,
ProtocolBase protocol) |
protected ProtocolBase |
IacucProtocolVersionServiceImpl.createProtocolNewVersionHook(ProtocolBase protocol) |
protected List<AnswerHeader> |
IacucProtocol.getAnswerHeaderForProtocol(ProtocolBase protocol) |
protected ProtocolNotificationContextBase |
IacucProtocolDocument.getDisapproveNotificationContextHook(ProtocolBase protocol) |
protected ProtocolModuleQuestionnaireBeanBase |
IacucProtocolVersionServiceImpl.getNewInstanceProtocolModuleQuestionnaireBeanHook(ProtocolBase protocol) |
protected ProtocolActionBase |
IacucProtocolDocument.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolStatusCode) |
protected ProtocolNotificationContextBase |
IacucProtocolAction.getProtocolInitialSaveNotificationContextHook(ProtocolBase protocol) |
protected String |
IacucProtocol.getProtocolMergeType(ProtocolBase amendment) |
protected void |
IacucProtocolAction.initialDocumentSaveAddRolesHook(String userId,
ProtocolBase protocol) |
protected boolean |
IacucProtocolDocument.isEligibleForMerging(String status,
ProtocolBase otherProtocol) |
void |
IacucProtocol.merge(ProtocolBase amendment,
String protocolModuleTypeCode) |
protected void |
IacucProtocol.mergeGeneralInfo(ProtocolBase amendment) |
protected void |
IacucProtocol.mergeProtocolAction(ProtocolBase amendment) |
protected void |
IacucProtocol.mergeProtocolExceptions(ProtocolBase amendment) |
protected void |
IacucProtocol.mergeProtocolProcedures(ProtocolBase amendment) |
protected void |
IacucProtocol.mergeProtocolSpeciesAndGroups(ProtocolBase amendment) |
protected void |
IacucProtocol.mergeProtocolThreers(ProtocolBase amendment) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
IacucProtocolActionMapping.getProtocol() |
ProtocolBase |
IacucProtocolActionBean.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
Class<? extends ProtocolBase> |
IacucProtocolActionAjaxServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected IacucProtocolAmendRenewal |
IacucActionHelper.getCorrectAmendment(List<ProtocolBase> protocols)
This method returns the amendRenewal bean with the current submission number.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolActionBase |
IacucProtocolAbandonServiceImpl.getNewActionHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
List<ProtocolBase> |
IacucProtocolAmendRenewServiceImpl.getAmendmentAndRenewals(String protocolNumber) |
protected Class<? extends ProtocolBase> |
IacucProtocolAmendRenewServiceImpl.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected void |
IacucProtocolAmendRenewServiceImpl.addModules(ProtocolBase protocol,
ProtocolAmendmentBean amendmentBean) |
protected ProtocolActionBase |
IacucProtocolAmendRenewServiceImpl.getNewAmendmentProtocolActionInstanceHook(ProtocolBase protocol) |
protected ModuleQuestionnaireBean |
IacucProtocolAmendRenewServiceImpl.getNewProtocolModuleQuestionnaireBeanInstanceHook(ProtocolBase protocol) |
protected ProtocolActionBase |
IacucProtocolAmendRenewServiceImpl.getNewRenewalProtocolActionInstanceHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolActionBase |
IacucProtocolApproveServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
void |
IacucProtocolApproveServiceImpl.grantFullApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Approves a full submission to a ProtocolBase.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolSubmissionBase |
IacucProtocolAssignToAgendaServiceImpl.findLastSubmission(ProtocolBase protocol) |
String |
IacucProtocolAssignToAgendaServiceImpl.getAssignedCommitteeId(ProtocolBase protocol) |
String |
IacucProtocolAssignToAgendaServiceImpl.getAssignedScheduleDate(ProtocolBase protocol) |
protected ProtocolActionBase |
IacucProtocolAssignToAgendaServiceImpl.getNewProtocolAssignToAgendaActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission) |
| Modifier and Type | Method and Description |
|---|---|
protected void |
IacucProtocolAssignCmtServiceImpl.addNewAction(ProtocolBase protocol,
IacucProtocolAssignCmtBean actionBean,
String prevSubmissionStatusCode) |
void |
IacucProtocolAssignCmtServiceImpl.assignToCommittee(ProtocolBase protocol,
IacucProtocolAssignCmtBean actionBean) |
void |
IacucProtocolAssignCmtService.assignToCommittee(ProtocolBase protocol,
IacucProtocolAssignCmtBean actionBean) |
protected ProtocolSubmissionBase |
IacucProtocolAssignCmtServiceImpl.findSubmission(ProtocolBase protocol) |
String |
IacucProtocolAssignCmtServiceImpl.getAssignedCommitteeId(ProtocolBase protocol) |
String |
IacucProtocolAssignCmtService.getAssignedCommitteeId(ProtocolBase protocol) |
String |
IacucProtocolAssignCmtServiceImpl.getAssignedScheduleId(ProtocolBase protocol) |
String |
IacucProtocolAssignCmtService.getAssignedScheduleId(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected IacucProtocolAction |
IacucProtocolCopyServiceImpl.getProtocolActionNewInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolActionBase |
IacucCommitteeDecisionServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String recordCommitteeDecisionActionCode) |
protected ProtocolSubmissionBase |
IacucCommitteeDecisionServiceImpl.getSubmission(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
void |
IacucProtocolGenericActionServiceImpl.disapprove(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Disapproves a protocol.
|
void |
IacucProtocolGenericActionServiceImpl.expire(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Expire a protocol.
|
protected ProtocolActionBase |
IacucProtocolGenericActionServiceImpl.getNewDisapprovedInRoutingProtocolActionInstanceHook(ProtocolBase protocol) |
protected ProtocolActionBase |
IacucProtocolGenericActionServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String protocolActionType) |
void |
IacucProtocolGenericActionServiceImpl.iacucAcknowledgement(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionService.iacucAcknowledgement(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionServiceImpl.iacucDeactivate(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionService.iacucDeactivate(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionServiceImpl.iacucHold(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionService.iacucHold(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionServiceImpl.iacucLiftHold(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
void |
IacucProtocolGenericActionService.iacucLiftHold(ProtocolBase protocol,
ProtocolGenericActionBean actionBean) |
ProtocolDocumentBase |
IacucProtocolGenericActionServiceImpl.returnForSMR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for specific minor revisions.
|
ProtocolDocumentBase |
IacucProtocolGenericActionServiceImpl.returnForSRR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for substantial revisions.
|
ProtocolDocumentBase |
IacucProtocolGenericActionServiceImpl.returnToPI(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI.
|
void |
IacucProtocolGenericActionServiceImpl.suspend(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Suspend the protocol by the PI or by the IRB Administrator.
|
void |
IacucProtocolGenericActionServiceImpl.terminate(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Terminate a protocol.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolSubmissionBase |
IacucProtocolModifySubmissionServiceImpl.findSubmission(ProtocolBase protocol) |
String |
IacucProtocolModifySubmissionServiceImpl.getAssignedScheduleId(ProtocolBase protocol) |
String |
IacucProtocolModifySubmissionService.getAssignedScheduleId(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
IacucProtocolQuestionnairePrintingServiceImpl.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolNotificationRendererBase |
IacucProtocolPrintWatermark.getNewProtocolNotificationRendererInstanceHook(ProtocolBase protocol) |
protected boolean |
IacucProtocolSummaryXmlStream.hasPermission(String userId,
ProtocolBase protocol,
String permissionName) |
| Modifier and Type | Method and Description |
|---|---|
void |
IacucProtocolProcessBillableService.processBillable(ProtocolBase protocol,
boolean billable)
This method does a permission check to make sure the logged in user can perform the action.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolSubmissionBase |
IacucReviewCommentsServiceImpl.getSubmission(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected boolean |
IacucProtocolActionServiceImpl.hasPermissionAsCommitteeMember(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper)
This method is to check if user has permission in committee home unit
|
protected boolean |
IacucProtocolActionServiceImpl.hasPermissionLeadUnit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper) |
protected boolean |
IacucProtocolActionServiceImpl.hasPermissionToSubmit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper)
This method is to check if user has permission to submit
|
void |
IacucProtocolActionServiceImpl.resetProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol) |
protected boolean |
SubmissionTypeValuesFinder.validStatusSubmissionTypePair(IacucProtocolSubmissionType submissionType,
String currentStatus,
ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
IacucProtocolUndoLastActionServiceImpl.getOldProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
IacucProtocolUndoLastActionServiceImpl.getOldProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolDocumentBase |
IacucProtocolWithdrawServiceImpl.administrativelyMarkIncomplete(ProtocolBase protocol,
ProtocolAdministrativelyIncompleteBean markIncompleteBean) |
ProtocolDocumentBase |
IacucProtocolWithdrawServiceImpl.administrativelyWithdraw(ProtocolBase protocol,
ProtocolAdministrativelyWithdrawBean administrativelyWithdrawBean) |
ProtocolDocumentBase |
IacucProtocolWithdrawServiceImpl.withdraw(ProtocolBase protocol,
ProtocolWithdrawBean withdrawBean) |
| Modifier and Type | Method and Description |
|---|---|
protected AttachmentDataSource |
IacucMeetingActionsAction.generateCorrespondenceDocumentAndAttach(ProtocolBase protocol,
ProtocolCorrespondence oldCorrespondence) |
| Modifier and Type | Method and Description |
|---|---|
protected void |
IacucCommitteeBatchCorrespondenceServiceImpl.applyFinalAction(ProtocolBase protocol,
BatchCorrespondenceBase batchCorrespondence) |
protected ProtocolActionBase |
IacucCommitteeBatchCorrespondenceServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
| Modifier and Type | Method and Description |
|---|---|
Class<? extends ProtocolBase> |
IacucProtocolAttachmentServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolAttachmentPersonnelBase |
IacucNotesAttachmentsHelper.createNewProtocolAttachmentPersonnelInstanceHook(ProtocolBase protocol) |
protected ProtocolAttachmentProtocolBase |
IacucNotesAttachmentsHelper.createNewProtocolAttachmentProtocolInstanceHook(ProtocolBase protocol) |
protected ProtocolNotepadBase |
IacucNotesAttachmentsHelper.createNewProtocolNotepadInstanceHook(ProtocolBase protocol) |
| Constructor and Description |
|---|
IacucProtocolAttachmentPersonnel(ProtocolBase protocol) |
IacucProtocolAttachmentProtocol(ProtocolBase protocol) |
IacucProtocolNotepad(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
IacucProtocolNotificationRoleQualifierServiceImpl.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
void |
IacucProtocolNotificationRoleQualifierServiceImpl.setProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
boolean |
IacucProtocolOnlineReviewServiceImpl.isProtocolInStateToBeReviewed(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected void |
IacucPersonnelHelper.initializeModifyProtocolPermission(ProtocolBase protocol) |
void |
IacucProtocolPersonnelServiceImpl.setPrincipalInvestigator(ProtocolPersonBase newPrincipalInvestigator,
ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected IacucProtocolAction |
IacucProtocolProposalDevelopmentProtocolDocumentServiceImpl.getProtocolActionNewInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
protected void |
IacucProtocolProposalDevelopmentProtocolDocumentServiceImpl.populateProtocolSpecificFieldsHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolTaskBase |
IacucQuestionnaireHelper.getModifyQnnrTaskHook(ProtocolBase protocol) |
protected ProtocolModuleQuestionnaireBeanBase |
IacucProtocolQuestionnaireAuditRule.getProtocolModuleQuestionnaireBean(ProtocolBase protocol) |
protected ProtocolModuleQuestionnaireBeanBase |
IacucQuestionnaireHelper.getProtocolModuleQuestionnaireBeanHook(ProtocolBase protocol) |
| Constructor and Description |
|---|
IacucSubmissionQuestionnaireHelper(ProtocolBase protocol,
String actionTypeCode,
String submissionNumber,
boolean readOnlyView) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
IacucQuestionnairePrintingServiceImpl.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected void |
IacucProtocolSpecialReviewServiceImpl.setProtocolExemptStudiesCheckListItemHook(ProtocolBase protocol,
SpecialReview specialReview) |
| Modifier and Type | Class and Description |
|---|---|
class |
Protocol
This class is Protocol Business Object.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
ProtocolVersionServiceImpl.createProtocolNewVersionHook(ProtocolBase protocol) |
protected ProtocolBase |
IrbJavaFunctionKrmsTermServiceImpl.getActiveProtocol(String protocolNumber) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
ProtocolVersionServiceImpl.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
ProtocolFinderDaoOjb.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
ProtocolDocument.getProtocolBOClassHook() |
protected Class<? extends ProtocolBase> |
ProtocolLookupableHelperServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
ProtocolActionBase |
ProtocolAbandonServiceImpl.getNewActionHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
ProtocolAmendRenewServiceImpl.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolAmendRenewServiceImpl.addModules(ProtocolBase protocol,
ProtocolAmendmentBean amendmentBean) |
protected ProtocolActionBase |
ProtocolAmendRenewServiceImpl.getNewAmendmentProtocolActionInstanceHook(ProtocolBase protocol) |
protected ModuleQuestionnaireBean |
ProtocolAmendRenewServiceImpl.getNewProtocolModuleQuestionnaireBeanInstanceHook(ProtocolBase protocol) |
protected ProtocolActionBase |
ProtocolAmendRenewServiceImpl.getNewRenewalProtocolActionInstanceHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolActionBase |
ProtocolApproveServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
void |
ProtocolApproveServiceImpl.grantFullApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Approves a full submission to a ProtocolBase.
|
| Modifier and Type | Method and Description |
|---|---|
String |
ProtocolAssignToAgendaServiceImpl.getAssignedCommitteeId(ProtocolBase protocol)
Get the committee currently assigned to the protocol.
|
String |
ProtocolAssignToAgendaServiceImpl.getAssignedScheduleDate(ProtocolBase protocol)
This method gets the date of the agenda that the protocol is assigned to.
|
protected ProtocolActionBase |
ProtocolAssignToAgendaServiceImpl.getNewProtocolAssignToAgendaActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolActionBase |
ProtocolCopyServiceImpl.getProtocolActionNewInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolActionBase |
CommitteeDecisionServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String recordCommitteeDecisionActionCode) |
protected ProtocolSubmission |
CommitteeDecisionServiceImpl.getSubmission(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolGenericActionServiceImpl.disapprove(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Disapproves a protocol.
|
void |
ProtocolGenericActionServiceImpl.expire(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Expire a protocol.
|
protected ProtocolActionBase |
ProtocolGenericActionServiceImpl.getNewDisapprovedInRoutingProtocolActionInstanceHook(ProtocolBase protocol) |
protected ProtocolActionBase |
ProtocolGenericActionServiceImpl.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String protocolActionType) |
protected ProtocolDocument |
ProtocolGenericActionServiceImpl.getReturnedVersionedDocument(ProtocolBase protocol) |
protected void |
ProtocolGenericActionServiceImpl.performDisapprove(ProtocolBase protocol) |
ProtocolDocument |
ProtocolGenericActionServiceImpl.returnForSMR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for specific minor revisions.
|
ProtocolDocument |
ProtocolGenericActionServiceImpl.returnForSRR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for substantial revisions.
|
ProtocolDocument |
ProtocolGenericActionServiceImpl.returnToPI(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI.
|
void |
ProtocolGenericActionServiceImpl.suspend(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Suspend the protocol by the PI or by the IRB Administrator.
|
void |
ProtocolGenericActionServiceImpl.terminate(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Terminate a protocol.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolNotificationRendererBase |
ProtocolPrintWatermark.getNewProtocolNotificationRendererInstanceHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolSubmissionBase |
ReviewCommentsServiceImpl.getSubmission(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
Class<? extends ProtocolBase> |
ProtocolActionAjaxServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected boolean |
ProtocolActionServiceImpl.hasPermissionAsCommitteeMember(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper)
This method is to check if user has permission in committee home unit
|
protected boolean |
ProtocolActionServiceImpl.hasPermissionLeadUnit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper) |
protected boolean |
ProtocolActionServiceImpl.hasPermissionToSubmit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper)
This method is to check if user has permission to submit
|
void |
ProtocolActionServiceImpl.resetProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
UndoLastActionServiceImpl.getOldProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
UndoLastActionServiceImpl.getOldProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolDocumentBase |
ProtocolWithdrawServiceImpl.administrativelyMarkIncomplete(ProtocolBase protocol,
ProtocolAdministrativelyIncompleteBean markIncompleteBean) |
ProtocolDocumentBase |
ProtocolWithdrawServiceImpl.administrativelyWithdraw(ProtocolBase protocol,
ProtocolAdministrativelyWithdrawBean administrativelyWithdrawBean) |
ProtocolDocumentBase |
ProtocolWithdrawServiceImpl.withdraw(ProtocolBase protocol,
ProtocolWithdrawBean withdrawBean) |
| Modifier and Type | Method and Description |
|---|---|
Class<? extends ProtocolBase> |
ProtocolAttachmentServiceImpl.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolAttachmentPersonnel |
NotesAttachmentsHelper.createNewProtocolAttachmentPersonnelInstanceHook(ProtocolBase protocol) |
protected ProtocolAttachmentProtocol |
NotesAttachmentsHelper.createNewProtocolAttachmentProtocolInstanceHook(ProtocolBase protocol) |
protected ProtocolNotepad |
NotesAttachmentsHelper.createNewProtocolNotepadInstanceHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected Class<? extends ProtocolBase> |
ProtocolOnlineReviewRedirectAction.getProtocolClass() |
| Modifier and Type | Method and Description |
|---|---|
boolean |
ProtocolOnlineReviewServiceImpl.isProtocolInStateToBeReviewed(ProtocolBase protocol)
Determine if the protocol is in a state that can be reviewed.
|
| Modifier and Type | Method and Description |
|---|---|
protected void |
PersonnelHelper.initializeModifyProtocolPermission(ProtocolBase protocol) |
void |
ProtocolPersonnelServiceImpl.setPrincipalInvestigator(ProtocolPersonBase newPrincipalInvestigator,
ProtocolBase protocol)
This method sets the principal investigator.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolTaskBase |
QuestionnaireHelper.getModifyQnnrTaskHook(ProtocolBase protocol) |
protected ProtocolModuleQuestionnaireBeanBase |
QuestionnaireHelper.getProtocolModuleQuestionnaireBeanHook(ProtocolBase protocol) |
| Constructor and Description |
|---|
IrbSubmissionQuestionnaireHelper(ProtocolBase protocol,
String actionTypeCode,
String submissionNumber,
boolean readOnlyView) |
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolSpecialReviewServiceImpl.setProtocolExemptStudiesCheckListItemHook(ProtocolBase protocol,
SpecialReview specialReview) |
| Modifier and Type | Interface and Description |
|---|---|
interface |
ProtocolDao<GenericProtocol extends ProtocolBase>
This class is used to run ojb query directly.
|
class |
ProtocolDaoOjbBase<GenericProtocol extends ProtocolBase>
This class is the implementation for ProtocolDao interface.
|
class |
ProtocolLookupableHelperServiceImplBase<GenericProtocol extends ProtocolBase>
This class handles searching for protocols.
|
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolBase |
ProtocolDocumentBase.createNewProtocolInstanceHook() |
protected abstract ProtocolBase |
ProtocolVersionServiceImplBase.createProtocolNewVersionHook(ProtocolBase protocol) |
ProtocolBase |
ProtocolFinderDaoOjbBase.findCurrentProtocolByNumber(String protocolNumber) |
ProtocolBase |
ProtocolFinderDao.findCurrentProtocolByNumber(String protocolNumber)
Find the current protocol given a protocolNumber.
|
protected abstract ProtocolBase |
ProtocolJavaFunctionKrmsTermServiceBase.getActiveProtocol(String protocolNumber) |
ProtocolBase |
ProtocolReviewerBase.getProtocol() |
ProtocolBase |
ProtocolDocumentBase.getProtocol()
This method is a convenience method for facilitating a 1:1 relationship between ProtocolDocumentBase
and ProtocolBase to the outside world - aka a single ProtocolBase field associated with ProtocolDocumentBase
|
ProtocolBase |
ProtocolAssociateBase.getProtocol()
Gets the protocol attribute.
|
ProtocolBase |
ProtocolVersionServiceImplBase.getProtocolVersion(String protocolNumber,
Integer sequenceNumber) |
ProtocolBase |
ProtocolVersionService.getProtocolVersion(String protocolNumber,
Integer sequenceNumber)
Get a particular version of a protocol.
|
ProtocolBase |
ProtocolBase.getSequenceOwner()
The SequenceOwner is returned; "this" should be returned if this associate is the sequence owner.
|
ProtocolBase |
ProtocolAssociateBase.getSequenceOwner()
The SequenceOwner is returned; "this" should be returned if this associate is the sequence owner.
|
| Modifier and Type | Method and Description |
|---|---|
List<ProtocolBase> |
ProtocolFinderDaoOjbBase.findProtocols(String protocolNumber) |
List<ProtocolBase> |
ProtocolFinderDao.findProtocols(String protocolNumber)
This method is to find all the versioned protocols, amendments, renewals with this protocolNumber.
|
List<ProtocolBase> |
ProtocolDaoOjbBase.getNotifiedProtocols(String committeeId,
Date startDate,
Date endDate) |
List<ProtocolBase> |
ProtocolDao.getNotifiedProtocols(String committeeId,
Date startDate,
Date endDate)
This method returns all Protocols that were given a decision status of "Specify Minor Revision" (SMR)
or "Substantive Revision Required" (SRR) by the specified committee in the specified date range.
|
protected abstract Class<? extends ProtocolBase> |
ProtocolVersionServiceImplBase.getProtocolBOClassHook() |
protected abstract Class<? extends ProtocolBase> |
ProtocolFinderDaoOjbBase.getProtocolBOClassHook() |
protected abstract Class<? extends ProtocolBase> |
ProtocolDocumentBase.getProtocolBOClassHook() |
protected abstract Class<? extends ProtocolBase> |
ProtocolDaoOjbBase.getProtocolBOClassHook() |
protected abstract Class<? extends ProtocolBase> |
ProtocolLookupableHelperServiceImplBase.getProtocolClassHook() |
List<ProtocolBase> |
ProtocolDocumentBase.getProtocolList()
This method is used by OJB to get around with anonymous keys issue.
|
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolBase.amendQuestionnaire(ProtocolBase amendment) |
void |
ProtocolBase.cleanupSpecialReviews(ProtocolBase srcProtocol) |
protected abstract ProtocolTaskBase |
ProtocolActionBase.createNewModifyProtocolTaskInstanceHook(ProtocolBase protocol) |
protected abstract ProtocolTaskBase |
ProtocolLookupableHelperServiceImplBase.createNewProtocolTaskInstanceHook(String taskName,
ProtocolBase protocol) |
protected abstract ProtocolBase |
ProtocolVersionServiceImplBase.createProtocolNewVersionHook(ProtocolBase protocol) |
protected void |
ProtocolVersionServiceImplBase.finalizeAttachmentProtocol(ProtocolBase protocol) |
protected void |
ProtocolDocumentBase.finalizeAttachmentProtocol(ProtocolBase protocol) |
protected void |
ProtocolVersionServiceImplBase.fixActionSequenceNumbers(ProtocolBase protocol,
ProtocolBase newProtocol)
The Versioning Service increments all of the sequence numbers.
|
protected abstract List<AnswerHeader> |
ProtocolBase.getAnswerHeaderForProtocol(ProtocolBase protocol) |
protected abstract ProtocolNotificationContextBase |
ProtocolDocumentBase.getDisapproveNotificationContextHook(ProtocolBase protocol) |
protected abstract ProtocolModuleQuestionnaireBeanBase |
ProtocolVersionServiceImplBase.getNewInstanceProtocolModuleQuestionnaireBeanHook(ProtocolBase protocol) |
protected abstract ProtocolActionBase |
ProtocolDocumentBase.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String actionTypeCode) |
protected abstract ProtocolNotificationContextBase |
ProtocolActionBase.getProtocolInitialSaveNotificationContextHook(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasAllPersonsCompletedTraining(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasAllPersonsCompletedTraining(ProtocolBase protocol)
This method check if all persons has completed training
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasFundingSourceContainsSponsor(ProtocolBase protocol,
String sponsor) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasFundingSourceContainsSponsor(ProtocolBase protocol,
String sponsor)
This method check if the protocol funding source sponsor contains a specified sponsor.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasFundingSourceContainsUnit(ProtocolBase protocol,
String unitNumber) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasFundingSourceContainsUnit(ProtocolBase protocol,
String unitNumber)
This method check if the protocol funding source units contains a specified unit.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasProtocolContainsAreaOfResearch(ProtocolBase protocol,
String areaOfResearchCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasProtocolContainsAreaOfResearch(ProtocolBase protocol,
String areaOfResearchCode)
This method check if the protocol areas of research contains a specified research area.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasProtocolContainsDocumentType(ProtocolBase protocol,
String documentTypeCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasProtocolContainsDocumentType(ProtocolBase protocol,
String documentTypeCode)
This method check if any of the protocol document type is the specified document type
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasProtocolContainsNotifySubmissionQualifierType(ProtocolBase protocol,
Integer submissionNumber,
String submissionQualifierTypeCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasProtocolContainsNotifySubmissionQualifierType(ProtocolBase protocol,
Integer submissionNumber,
String submissionQualifierTypeCode)
This method check if the selected submission qualifier type is a specified type
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasProtocolContainsOrganization(ProtocolBase protocol,
String organizationId) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasProtocolContainsOrganization(ProtocolBase protocol,
String organizationId)
This method check if the protocol organizations contains a specified organization.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.hasSubmissionType(ProtocolBase protocol,
Integer submissionNumber,
String submissionTypeCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.hasSubmissionType(ProtocolBase protocol,
Integer submissionNumber,
String submissionTypeCode)
This method check if the selected submission type is a specified type
|
void |
ProtocolAssociateBase.init(ProtocolBase aProtocol)
This inits the object to an unpersisted state by calling
Sequenceable.resetPersistenceState()
Also, sets the protocol, protocol id, sequence number, and protocol number. |
protected abstract void |
ProtocolActionBase.initialDocumentSaveAddRolesHook(String userId,
ProtocolBase protocol)
This method is used in conjunction with initialDocumentSave to populuate the
appropriate roles for the given protocl (iacuc or irb).
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isLeadUnitProtocolCampus(ProtocolBase protocol,
String campusCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isLeadUnitProtocolCampus(ProtocolBase protocol,
String campusCode)
This method check if the lead unit of the ProtocolBase belong to campus
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isOrganizationChangedInAmendmentOrRenewal(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isOrganizationChangedInAmendmentOrRenewal(ProtocolBase protocol)
This method check if the Organazation is changed in amendment/renewal.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isPiChangedInAmendmentOrRenewal(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isPiChangedInAmendmentOrRenewal(ProtocolBase protocol)
This method check if the Principal Investigator is changed in amendment/renewal.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isPINotFaculty(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isPINotFaculty(ProtocolBase protocol)
This method checks if the principal investigator is not a faculty member.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isProtocolAmendment(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isProtocolAmendment(ProtocolBase protocol)
This method check if the protocol is an amendment
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isProtocolInSubmission(ProtocolBase protocol,
String submissionTypeCode) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isProtocolInSubmission(ProtocolBase protocol,
String submissionTypeCode)
This method check if the protocol is in the specified submission
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isProtocolLeadUnitBelow(ProtocolBase protocol,
String unitNumber) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isProtocolLeadUnitBelow(ProtocolBase protocol,
String leadUnit)
This method check if the lead unit for the protocol is below a specified unit in the hierarchy
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isProtocolRenewal(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isProtocolRenewal(ProtocolBase protocol)
This method check if the protocol is an renewal
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isProtocolRenewalWithAmendment(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isProtocolRenewalWithAmendment(ProtocolBase protocol)
This method check if the protocol is renewal with amendment
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isSpecialReviewExists(ProtocolBase protocol) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isSpecialReviewExists(ProtocolBase protocol)
This method check if the protocol contains a specified special review type.
|
Boolean |
ProtocolJavaFunctionKrmsTermServiceBase.isSubmitUserProtocolPi(ProtocolBase protocol,
String submitUserId) |
Boolean |
ProtocolJavaFunctionKrmsTermService.isSubmitUserProtocolPi(ProtocolBase protocol,
String userId)
This method check if the submit user is the PI of the protocol.
|
protected void |
ProtocolVersionServiceImplBase.materializeCollections(ProtocolBase protocol) |
void |
ProtocolBase.merge(ProtocolBase amendment)
This method merges the data of the amended protocol into this protocol.
|
void |
ProtocolBase.merge(ProtocolBase amendment,
boolean mergeActions) |
abstract void |
ProtocolBase.merge(ProtocolBase amendment,
String protocolModuleTypeCode) |
protected void |
ProtocolBase.mergeAttachments(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeFundingSources(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeGeneralInfo(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeNotepads(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeOrganizations(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeOthers(ProtocolBase amendment) |
protected void |
ProtocolBase.mergePersonnel(ProtocolBase amendment) |
protected abstract void |
ProtocolBase.mergeProtocolAction(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeProtocolPermissions(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeProtocolQuestionnaire(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeProtocolSubmission(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeReferences(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeResearchAreas(ProtocolBase amendment) |
protected void |
ProtocolBase.mergeSpecialReview(ProtocolBase amendment) |
void |
ProtocolAssociateBase.postInitHook(ProtocolBase aProtocol)
This method is designed to allow subclasses to perform additional initialization not performed by the final init method.
|
protected void |
ProtocolBase.restoreAttachments(ProtocolBase protocol) |
void |
ProtocolReviewerBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolDocumentBase.setProtocol(ProtocolBase protocol)
This method is a convenience method for facilitating a 1:1 relationship between ProtocolDocumentBase
and ProtocolBase to the outside world - aka a single ProtocolBase field associated with ProtocolDocumentBase
|
void |
ProtocolAssociateBase.setProtocol(ProtocolBase protocol)
Sets the protocol attribute value.
|
void |
ProtocolBase.setSequenceOwner(ProtocolBase newOwner)
This sets the sequence owner on the associate.
|
void |
ProtocolAssociateBase.setSequenceOwner(ProtocolBase newlyVersionedOwner)
This sets the sequence owner on the associate.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolDocumentBase.setProtocolList(List<ProtocolBase> protocolList)
This method is used by OJB to get around with anonymous keys issue.
|
| Constructor and Description |
|---|
ProtocolAssociateBase(ProtocolBase protocol)
Constructs a ProtocolAssociateBase setting protocol related fields.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolSubmissionDocBase.getProtocol() |
ProtocolBase |
ProtocolActionBean.getProtocol() |
ProtocolBase |
ActionHelperBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
abstract Class<? extends ProtocolBase> |
ProtocolActionAjaxServiceImplBase.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolAmendRenewalBase |
ActionHelperBase.getCorrectAmendment(List<ProtocolBase> protocols)
This method returns the amendRenewal bean with the current submission number.
|
| Constructor and Description |
|---|
ProtocolActionBase(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
ProtocolActionBase(ProtocolBase protocol,
String protocolActionTypeCode) |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolAbandonServiceImplBase.abandonProtocol(ProtocolBase protocol,
ProtocolGenericActionBean protocolAbandonBean) |
void |
ProtocolAbandonService.abandonProtocol(ProtocolBase protocol,
ProtocolGenericActionBean protocolAbandonBean)
This method is to abandon protocol which is SRR or SMR.
|
abstract ProtocolActionBase |
ProtocolAbandonServiceImplBase.getNewActionHook(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolAmendRenewalBase.getProtocol() |
ProtocolBase |
ProtocolAmendRenewModuleBase.getSequenceOwner() |
ProtocolBase |
ProtocolAmendRenewalBase.getSequenceOwner()
The SequenceOwner is returned; "this" should be returned if this associate is the sequence owner.
|
| Modifier and Type | Method and Description |
|---|---|
List<ProtocolBase> |
ProtocolAmendRenewServiceImplBase.getAmendmentAndRenewals(String protocolNumber) |
List<ProtocolBase> |
ProtocolAmendRenewService.getAmendmentAndRenewals(String protocolNumber)
Get all of the Amendments and Renewals for a given protocol.
|
Collection<ProtocolBase> |
ProtocolAmendRenewServiceImplBase.getAmendments(String protocolNumber) |
Collection<ProtocolBase> |
ProtocolAmendRenewService.getAmendments(String protocolNumber)
This method returns all of the amendments associated with a protocol.
|
protected abstract Class<? extends ProtocolBase> |
ProtocolAmendRenewServiceImplBase.getProtocolBOClassHook() |
Collection<ProtocolBase> |
ProtocolAmendRenewServiceImplBase.getRenewals(String protocolNumber) |
Collection<ProtocolBase> |
ProtocolAmendRenewService.getRenewals(String protocolNumber)
This method returns all of the renewals associated with a protocol.
|
| Modifier and Type | Method and Description |
|---|---|
protected abstract void |
ProtocolAmendRenewServiceImplBase.addModules(ProtocolBase protocol,
ProtocolAmendmentBean amendmentBean) |
protected ProtocolActionBase |
ProtocolAmendRenewServiceImplBase.createCreateAmendmentProtocolAction(ProtocolBase protocol,
String protocolNumber)
Create a ProtocolBase Action indicating that an amendment has been created.
|
protected ProtocolActionBase |
ProtocolAmendRenewServiceImplBase.createCreateRenewalProtocolAction(ProtocolBase protocol,
String protocolNumber)
Create a ProtocolBase Action indicating that a renewal has been created.
|
protected abstract ProtocolActionBase |
ProtocolAmendRenewServiceImplBase.getNewAmendmentProtocolActionInstanceHook(ProtocolBase protocol) |
protected abstract ModuleQuestionnaireBean |
ProtocolAmendRenewServiceImplBase.getNewProtocolModuleQuestionnaireBeanInstanceHook(ProtocolBase protocol) |
protected abstract ProtocolActionBase |
ProtocolAmendRenewServiceImplBase.getNewRenewalProtocolActionInstanceHook(ProtocolBase protocol) |
protected boolean |
ProtocolAmendRenewServiceImplBase.isAmendmentCompleted(ProtocolBase protocol)
Has the amendment completed, e.g.
|
protected void |
ProtocolAmendRenewServiceImplBase.removeEditedQuestionaire(ProtocolBase protocol) |
void |
ProtocolAmendRenewalBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolAmendRenewModuleBase.setSequenceOwner(ProtocolBase newlyVersionedOwner) |
void |
ProtocolAmendRenewalBase.setSequenceOwner(ProtocolBase newlyVersionedOwner)
This sets the sequence owner on the associate.
|
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolApproveServiceImplBase.finalizeReviewsAndSave(ProtocolBase protocol,
String protocolActionTypeCode,
String reviewAnnotation) |
protected void |
ProtocolApproveServiceImplBase.generateProtocolActionAndAttach(ProtocolBase protocol,
ProtocolApproveBean actionBean,
String protocolActionTypeCode) |
protected abstract ProtocolActionBase |
ProtocolApproveServiceImplBase.getNewProtocolActionInstanceHook(ProtocolBase protocol,
Object object,
String protocolActionTypeCode) |
void |
ProtocolApproveServiceImplBase.grantAdminApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Administratively approves a ProtocolBase.
|
void |
ProtocolApproveService.grantAdminApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Administratively approves a ProtocolBase.
|
void |
ProtocolApproveService.grantFullApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Approves a full submission to a ProtocolBase.
|
void |
ProtocolApproveServiceImplBase.grantResponseApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Approves a response submission to a ProtocolBase.
|
void |
ProtocolApproveService.grantResponseApproval(ProtocolBase protocol,
ProtocolApproveBean actionBean)
Approves a response submission to a ProtocolBase.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolAssignToAgendaServiceImplBase.assignToAgenda(ProtocolBase protocol,
ProtocolAssignToAgendaBean actionBean)
Assign a protocol to an agenda.
|
void |
ProtocolAssignToAgendaService.assignToAgenda(ProtocolBase protocol,
ProtocolAssignToAgendaBean actionBean)
Assign a protocol to an agenda.
|
protected ProtocolSubmissionBase |
ProtocolAssignToAgendaServiceImplBase.findSubmission(ProtocolBase protocol) |
String |
ProtocolAssignToAgendaService.getAssignedCommitteeId(ProtocolBase protocol)
Get the committee currently assigned to the protocol.
|
String |
ProtocolAssignToAgendaServiceImplBase.getAssignedCommitteeName(ProtocolBase protocol)
This method gets the committee name that the protocol is assigned to.
|
String |
ProtocolAssignToAgendaService.getAssignedCommitteeName(ProtocolBase protocol)
This method gets the committee name that the protocol is assigned to.
|
String |
ProtocolAssignToAgendaService.getAssignedScheduleDate(ProtocolBase protocol)
This method gets the date of the agenda that the protocol is assigned to.
|
ProtocolActionBase |
ProtocolAssignToAgendaServiceImplBase.getAssignedToAgendaProtocolAction(ProtocolBase protocol)
This method returns the protocol action that assigned the passed in protocol to a committee agenda.
|
ProtocolActionBase |
ProtocolAssignToAgendaService.getAssignedToAgendaProtocolAction(ProtocolBase protocol)
This method returns the protocol action that assigned the passed in protocol to a committee agenda.
|
String |
ProtocolAssignToAgendaServiceImplBase.getAssignToAgendaComments(ProtocolBase protocol)
This method gets any comments made when the protocol was assigned.
|
String |
ProtocolAssignToAgendaService.getAssignToAgendaComments(ProtocolBase protocol)
This method gets any comments made when the protocol was assigned.
|
protected abstract ProtocolActionBase |
ProtocolAssignToAgendaServiceImplBase.getNewProtocolAssignToAgendaActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission) |
boolean |
ProtocolAssignToAgendaServiceImplBase.isAssignedToAgenda(ProtocolBase protocol)
This method returns a boolean pertaining to whether the protocol is assigned to an agenda or not.
|
boolean |
ProtocolAssignToAgendaService.isAssignedToAgenda(ProtocolBase protocol)
This method returns a boolean pertaining to whether the protocol is assigned to an agenda or not.
|
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolActionBase |
ProtocolCopyServiceImplBase.getProtocolActionNewInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
protected void |
ProtocolCopyServiceImplBase.refreshAttachmentsPersonnels(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
void |
AdminCorrectionServiceImplBase.sendCorrectionNotification(ProtocolBase protocol,
AdminCorrectionBean adminCorrectionBean) |
void |
AdminCorrectionService.sendCorrectionNotification(ProtocolBase protocol,
AdminCorrectionBean adminCorrectionBean) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolActionsCorrespondenceBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolActionCorrespondenceGenerationServiceImplBase.buildAndAttachProtocolCorrespondence(ProtocolBase protocol,
byte[] data,
String correspTypeCode) |
void |
ProtocolActionsCorrespondenceBase.setProtocol(ProtocolBase protcol) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolActionBase |
CommitteeDecisionServiceImplBase.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String recordCommitteeDecisionActionCode) |
protected abstract ProtocolSubmissionBase |
CommitteeDecisionServiceImplBase.getSubmission(ProtocolBase protocol) |
protected void |
CommitteeDecisionServiceImplBase.proccessAbstainers(CD committeeDecision,
List<CommitteeMembershipBase> committeeMemberships,
ProtocolBase protocol,
Long scheduleIdFk,
Long submissionIdFk) |
protected void |
CommitteeDecisionServiceImplBase.proccessRecusers(CD committeeDecision,
List<CommitteeMembershipBase> committeeMemberships,
ProtocolBase protocol,
Long scheduleIdFk,
Long submissionIdFk) |
void |
CommitteeDecisionServiceImplBase.processCommitteeDecision(ProtocolBase protocol,
CD committeeDecision)
Record the committee's decision.
|
void |
CommitteeDecisionService.processCommitteeDecision(ProtocolBase protocol,
CD committeeDecision)
Record the committee's decision.
|
protected void |
CommitteeDecisionServiceImplBase.saveProtocolMeetingVoter(ProtocolMeetingVoterBase voter,
ProtocolBase protocol,
Long scheduleIdFk,
String personId,
Integer rolodexId,
Long submissionIdFk) |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolDeleteServiceImplBase.delete(ProtocolBase protocol,
ProtocolDeleteBean deleteBean)
We never delete documents from the database.
|
void |
ProtocolDeleteService.delete(ProtocolBase protocol,
ProtocolDeleteBean deleteBean)
Delete a protocol/amendment/renewal.
|
| Modifier and Type | Method and Description |
|---|---|
List<T> |
FollowupActionServiceImplBase.getFollowupsForProtocol(ProtocolBase protocol) |
List<T> |
FollowupActionService.getFollowupsForProtocol(ProtocolBase protocol) |
boolean |
FollowupActionServiceImplBase.isActionOpenForFollowup(String protocolActionTypeCode,
ProtocolBase protocol) |
boolean |
FollowupActionService.isActionOpenForFollowup(String protocolActionTypeCode,
ProtocolBase protocol)
Determines if the action is a follow-up action for the current state of the
protocol.
|
| Modifier and Type | Method and Description |
|---|---|
protected void |
ProtocolGenericActionServiceImplBase.createCorrespondenceAndAttach(ProtocolBase protocol,
String protocolActionType) |
protected ProtocolActionBase |
ProtocolGenericActionServiceImplBase.createProtocolActionAndAttach(ProtocolBase protocol,
ProtocolGenericActionBean actionBean,
String protocolActionType) |
void |
ProtocolGenericActionService.disapprove(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Disapproves a protocol.
|
void |
ProtocolGenericActionService.expire(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Expire a protocol.
|
protected abstract ProtocolActionBase |
ProtocolGenericActionServiceImplBase.getNewDisapprovedInRoutingProtocolActionInstanceHook(ProtocolBase protocol) |
protected abstract ProtocolActionBase |
ProtocolGenericActionServiceImplBase.getNewProtocolActionInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase submission,
String protocolActionType) |
protected ProtocolDocumentBase |
ProtocolGenericActionServiceImplBase.getReturnedVersionedDocument(ProtocolBase protocol) |
protected ProtocolDocumentBase |
ProtocolGenericActionServiceImplBase.getVersionedDocument(ProtocolBase protocol) |
protected void |
ProtocolGenericActionServiceImplBase.performDisapprove(ProtocolBase protocol) |
protected void |
ProtocolGenericActionServiceImplBase.performGenericAction(ProtocolBase protocol,
ProtocolGenericActionBean actionBean,
String protocolActionType,
String newProtocolStatus)
Performs the generic action, which includes a state change, action date, and a comment, that's it!
|
void |
ProtocolGenericActionServiceImplBase.recall(ProtocolBase protocol) |
void |
ProtocolGenericActionService.recall(ProtocolBase protocol)
Recalls the proposal
|
void |
ProtocolGenericActionServiceImplBase.recordDisapprovedInRoutingActionAndUpdateStatuses(ProtocolBase protocol,
org.kuali.rice.kew.actiontaken.ActionTakenValue latestCurrentActionTakenVal) |
void |
ProtocolGenericActionService.recordDisapprovedInRoutingActionAndUpdateStatuses(ProtocolBase protocol,
org.kuali.rice.kew.actiontaken.ActionTakenValue latestCurrentActionTakenVal)
This method will insert the disapproved action into the given protocol's action list using the
annotation and date data from the actionTakenVal argument.
|
ProtocolDocumentBase |
ProtocolGenericActionService.returnForSMR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for specific minor revisions.
|
ProtocolDocumentBase |
ProtocolGenericActionService.returnForSRR(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI for substantial revisions.
|
ProtocolDocumentBase |
ProtocolGenericActionService.returnToPI(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Returns the protocol to the PI.
|
void |
ProtocolGenericActionService.suspend(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Suspend the protocol by the PI or by the IRB Administrator.
|
void |
ProtocolGenericActionService.terminate(ProtocolBase protocol,
ProtocolGenericActionBean actionBean)
Terminate a protocol.
|
ProtocolDocumentBase |
ProtocolGenericActionServiceImplBase.versionAfterDisapprovalInRouting(ProtocolBase oldProtocol) |
ProtocolDocumentBase |
ProtocolGenericActionService.versionAfterDisapprovalInRouting(ProtocolBase protocol)
Handles the versioning of the protocol following its disapproval in routing.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolQuestionnairePrintingServiceImplBase.getProtocol() |
ProtocolBase |
ProtocolPrintPermissionUtils.getProtocol()
Gets the protocol attribute.
|
| Modifier and Type | Method and Description |
|---|---|
protected abstract Class<? extends ProtocolBase> |
ProtocolQuestionnairePrintingServiceImplBase.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolNotificationRendererBase |
ProtocolPrintWatermarkBase.getNewProtocolNotificationRendererInstanceHook(ProtocolBase protocol) |
protected Printable |
ProtocolPrintingServiceImplBase.getPrintableArtifacts(ProtocolBase protocol,
String reportType,
StringBuffer fileName,
Map reportParameters) |
Printable |
ProtocolPrintingServiceImplBase.getProtocolPrintArtifacts(ProtocolBase protocol) |
Printable |
ProtocolPrintingService.getProtocolPrintArtifacts(ProtocolBase protocol)
This method is to get the printable Artifacts for the selected protocol.
|
void |
ProtocolQuestionnairePrintingServiceImplBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolPrintPermissionUtils.setProtocol(ProtocolBase protocol)
Sets the protocol attribute value.
|
void |
ProtocolQuestionnairePrintingServiceImplBase.setupQnPrintOption(List<AnswerHeader> answerHeaders,
ProtocolBase protocol,
List<QuestionnairePrintOption> questionnairesToPrints) |
void |
ProtocolQuestionnairePrintingService.setupQnPrintOption(List<AnswerHeader> answerHeaders,
ProtocolBase protocol,
List<QuestionnairePrintOption> questionnairesToPrints)
This method is to set up the questionnaire print list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ReviewCommentsServiceImplBase.addReviewAttachment(PRA newReviewAttachment,
List<PRA> reviewAttachments,
ProtocolBase protocol) |
void |
ReviewCommentsService.addReviewAttachment(PRA newReviewAttachment,
List<PRA> reviewAttachments,
ProtocolBase protocol)
This method is to add review attachment in OLR or manage review attachment
|
void |
ReviewCommentsServiceImplBase.addReviewComment(CommitteeScheduleMinuteBase newReviewComment,
List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol) |
void |
ReviewCommentsService.addReviewComment(CommitteeScheduleMinuteBase newReviewComment,
List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol)
Adds the newReviewComment to the list of reviewComments in the given protocol.
|
protected abstract ProtocolSubmissionBase |
ReviewCommentsServiceImplBase.getSubmission(ProtocolBase protocol) |
void |
ReviewCommentsServiceImplBase.moveDownReviewComment(List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol,
int fromIndex) |
void |
ReviewCommentsService.moveDownReviewComment(List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol,
int fromIndex)
Moves one review comment down the list by one value.
|
void |
ReviewCommentsServiceImplBase.moveUpReviewComment(List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol,
int fromIndex) |
void |
ReviewCommentsService.moveUpReviewComment(List<CommitteeScheduleMinuteBase> reviewComments,
ProtocolBase protocol,
int fromIndex)
Moves one review comment up the list by one value.
|
boolean |
ReviewCommentsServiceImplBase.setHideReviewerName(ProtocolBase protocol,
int submissionNumber) |
boolean |
ReviewCommentsService.setHideReviewerName(ProtocolBase protocol,
int submissionNumber)
This method is to check whether there is any review comments can display reviewer name
based on IRB_DISPLAY_REVIEWER_NAME parameter, and role based business rule.
|
| Modifier and Type | Field and Description |
|---|---|
protected ProtocolBase |
ProtocolActionMappingBase.protocol |
| Modifier and Type | Field and Description |
|---|---|
protected ProtocolDao<? extends ProtocolBase> |
ProtocolActionMappingBase.dao |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolUndoActionMapping.getProtocol() |
ProtocolBase |
ProtocolActionUpdateMapping.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
boolean |
ProtocolActionServiceImplBase.canPerformAction(String actionTypeCode,
ProtocolBase protocol)
This method is to check whether 'actionTypeCode' can be performed based on protocol's status code or submission code or other
condition specified in rule.
|
List<String> |
ProtocolActionServiceImplBase.getActionsAllowed(ProtocolBase protocol) |
List<String> |
ProtocolActionService.getActionsAllowed(ProtocolBase protocol)
This method is to get a list of protocol actions that can be performed based on
this protocol's status or submission status and user's permission
|
protected abstract boolean |
ProtocolActionServiceImplBase.hasPermissionLeadUnit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper) |
protected abstract boolean |
ProtocolActionServiceImplBase.hasPermissionToSubmit(String actionTypeCode,
ProtocolBase protocol,
ActionRightMapping rightMapper) |
boolean |
ProtocolActionServiceImplBase.isActionAllowed(String actionTypeCode,
ProtocolBase protocol) |
boolean |
ProtocolActionService.isActionAllowed(String actionTypeCode,
ProtocolBase protocol)
This method is to check if this protocol action can be performed based on protocol status or submission status
and also check if the user is authorized to perform this action.
|
boolean |
ProtocolActionServiceImplBase.isActionOpenForFollowup(String protocolActionTypeCode,
ProtocolBase protocol)
Determines whether the given action in the protocol should be opened, based on whether it is a followup action.
|
boolean |
ProtocolActionService.isActionOpenForFollowup(String protocolActionTypeCode,
ProtocolBase protocol)
Determines whether the given action in the protocol should be opened, based on whether it is a followup action.
|
boolean |
ProtocolActionServiceImplBase.isProtocolPersonnel(ProtocolBase protocol) |
boolean |
ProtocolActionService.isProtocolPersonnel(ProtocolBase protocol)
Determines whether the logged in user is ProtocolBase Personnel
|
abstract void |
ProtocolActionServiceImplBase.resetProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol) |
void |
ProtocolActionService.resetProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol)
This method is to undo the protocol status or submission status update.
|
void |
ProtocolUndoActionMapping.setProtocol(ProtocolBase protocol) |
void |
ProtocolActionUpdateMapping.setProtocol(ProtocolBase protocol) |
void |
ProtocolActionMappingBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolActionServiceImplBase.updateProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol) |
void |
ProtocolActionService.updateProtocolStatus(ProtocolActionBase protocolActionBo,
ProtocolBase protocol)
This method is to update protocol status or submission status after the action is submitted.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolActionMappingBase.setDao(ProtocolDao<? extends ProtocolBase> dao) |
void |
ProtocolActionServiceImplBase.setProtocolDao(ProtocolDao<? extends ProtocolBase> protocolDao) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolBase |
UndoLastActionServiceImplBase.getOldProtocol(ProtocolBase protocol)
Get the last protocol version before the action we are trying to undo.
|
| Modifier and Type | Method and Description |
|---|---|
boolean |
UndoLastActionBeanHelperBase.canUndoLastAction(ProtocolBase protocol) |
protected void |
UndoLastActionServiceImplBase.convertReviewComments(ProtocolBase protocol) |
protected void |
UndoLastActionServiceImplBase.createOnlnReviews(ProtocolBase protocol,
ProtocolBase oldProtocol) |
protected abstract ProtocolBase |
UndoLastActionServiceImplBase.getOldProtocol(ProtocolBase protocol)
Get the last protocol version before the action we are trying to undo.
|
protected ProtocolReviewer |
UndoLastActionServiceImplBase.getReviewer(ProtocolOnlineReviewBase onlineReview,
ProtocolBase protocol) |
protected boolean |
UndoLastActionBeanHelperBase.isProtocolDeleted(ProtocolBase protocol) |
protected void |
UndoLastActionServiceImplBase.resetProtocolStatus(ProtocolBase protocol) |
protected void |
UndoLastActionServiceImplBase.setNewOnlnReview(ProtocolOnlineReviewBase copiedReview,
ProtocolReviewer reviewer,
ProtocolBase protocol) |
protected void |
UndoLastActionServiceImplBase.updateProtocolReviews(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
abstract ProtocolDocumentBase |
ProtocolWithdrawServiceImplBase.administrativelyMarkIncomplete(ProtocolBase protocol,
ProtocolAdministrativelyIncompleteBean markIncompleteBean) |
ProtocolDocumentBase |
ProtocolWithdrawService.administrativelyMarkIncomplete(ProtocolBase protocol,
ProtocolAdministrativelyIncompleteBean markIncompleteBean)
Perform the task of administratively marking a protocol as 'incomplete'.
|
abstract ProtocolDocumentBase |
ProtocolWithdrawServiceImplBase.administrativelyWithdraw(ProtocolBase protocol,
ProtocolAdministrativelyWithdrawBean administrativelyWithdrawBean) |
ProtocolDocumentBase |
ProtocolWithdrawService.administrativelyWithdraw(ProtocolBase protocol,
ProtocolAdministrativelyWithdrawBean administrativelyWithdrawBean)
Perform the task of administratively withdrawing a protocol.
|
protected void |
ProtocolWithdrawServiceImplBase.cancelWorkflow(ProtocolBase protocol)
By canceling the protocol in workflow, we are preventing it from being
reviewed by the IRB office.
|
protected void |
ProtocolWithdrawServiceImplBase.generateCorrespondenceDocumentAndAttach(ProtocolBase protocol,
ProtocolWithdrawBean withdrawBean)
This method will generate a correspondence document, and attach it to the protocol.
|
protected ProtocolSubmissionBase |
ProtocolWithdrawServiceImplBase.getSubmission(ProtocolBase protocol)
Get the submission that is being withdrawn.
|
abstract ProtocolDocumentBase |
ProtocolWithdrawServiceImplBase.withdraw(ProtocolBase protocol,
ProtocolWithdrawBean withdrawBean) |
ProtocolDocumentBase |
ProtocolWithdrawService.withdraw(ProtocolBase protocol,
ProtocolWithdrawBean withdrawBean)
Perform the task of withdrawing a protocol.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolTaskBase.getProtocol()
Get the ProtocolBase.
|
| Modifier and Type | Method and Description |
|---|---|
protected boolean |
ProtocolAuthorizerBase.canExecuteAction(ProtocolBase protocol,
String protocolActionTypeCode)
Can the user on the current thread execute the given action for the given protocol?
|
protected abstract ProtocolTaskBase |
ProtocolDocumentAuthorizerBase.createNewProtocolTaskInstanceHook(String taskName,
ProtocolBase protocol) |
protected boolean |
ProtocolAuthorizerBase.hasPermission(String userId,
ProtocolBase protocol,
String permissionName)
Does the given user has the permission for this protocol?
|
protected boolean |
ProtocolAuthorizerBase.isAmendment(ProtocolBase protocol)
Is the protocol an amendment protocol?
|
protected boolean |
ProtocolAuthorizerBase.isAmendmentOrRenewal(ProtocolBase protocol)
Is the protocol an amendment or renewal protocol?
Including continuation here - since continuation is similar to renewal
|
protected boolean |
ContinuationAuthorizer.isAmendmentOrRenewalOrContinuation(ProtocolBase protocol) |
boolean |
ProtocolAssignReviewersCmtSelAuthorizer.isOnNode(ProtocolBase protocol) |
boolean |
ProtocolAssignReviewersAuthorizer.isOnNode(ProtocolBase protocol) |
boolean |
ProtocolAssignReviewersCmtSelAuthorizer.willBeOnNode(String username,
ProtocolBase protocol) |
| Constructor and Description |
|---|
ProtocolTaskBase(String taskGroupName,
String taskName,
ProtocolBase protocol)
Constructs a ProtocolTaskBase.
|
ProtocolTaskBase(String taskGroupName,
String taskName,
ProtocolBase protocol,
String genericTaskName) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolCorrespondence.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolCorrespondence.setProtocol(ProtocolBase protocol) |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
ProtocolCustomDataHelperBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
ProtocolAttachmentServiceImplBase.getActiveProtocol(String protocolNumber) |
ProtocolBase |
NotesAttachmentsHelperBase.getProtocol()
Get the ProtocolBase.
|
| Modifier and Type | Method and Description |
|---|---|
abstract Class<? extends ProtocolBase> |
ProtocolAttachmentServiceImplBase.getProtocolClassHook() |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolAttachmentPersonnelBase |
NotesAttachmentsHelperBase.createNewProtocolAttachmentPersonnelInstanceHook(ProtocolBase protocol) |
protected abstract ProtocolAttachmentProtocolBase |
NotesAttachmentsHelperBase.createNewProtocolAttachmentProtocolInstanceHook(ProtocolBase protocol) |
protected abstract ProtocolNotepadBase |
NotesAttachmentsHelperBase.createNewProtocolNotepadInstanceHook(ProtocolBase protocol) |
| Constructor and Description |
|---|
ProtocolAttachmentBase(ProtocolBase protocol)
Convenience ctor to set the protocol, protocol id and the protocolNumber from the passed in protocol.
|
ProtocolAttachmentPersonnelBase(ProtocolBase protocol)
Convenience ctor to add the protocol as an owner.
|
ProtocolAttachmentProtocolBase(ProtocolBase protocol)
Convenience ctor to add the protocol as an owner.
|
ProtocolNotepadBase(ProtocolBase protocol)
Convenience ctor to add the protocol as an owner.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolNotificationRoleQualifierServiceImpl.getProtocol() |
ProtocolBase |
ProtocolNotificationRoleQualifierService.getProtocol()
Returns the ProtocolBase.
|
ProtocolBase |
ProtocolNotificationRequestBeanBase.getProtocol() |
ProtocolBase |
ProtocolNotificationRendererBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolNotificationRoleQualifierServiceImpl.setProtocol(ProtocolBase protocol) |
void |
ProtocolNotificationRoleQualifierService.setProtocol(ProtocolBase protocol)
Sets the ProtocolBase.
|
void |
ProtocolNotificationRequestBeanBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolNotificationRendererBase.setProtocol(ProtocolBase protocol) |
| Constructor and Description |
|---|
ProtocolNotificationContextBase(ProtocolBase protocol,
ProtocolOnlineReviewBase protocolOnlineReview,
String actionTypeCode,
String contextName,
NotificationRenderer renderer)
Constructs a protocol notification context and sets the necessary services.
|
ProtocolNotificationContextBase(ProtocolBase protocol,
String actionTypeCode,
String contextName,
NotificationRenderer renderer)
Constructs an IRB notification context and sets the necessary services.
|
ProtocolNotificationRendererBase(ProtocolBase protocol)
Constructs a shared protocol notification renderer.
|
ProtocolNotificationRequestBeanBase(ProtocolBase protocol,
ProtocolOnlineReviewBase protocolOnlineReview,
String actionType,
String description,
String docNumber,
String olrEvent) |
ProtocolNotificationRequestBeanBase(ProtocolBase protocol,
String actionType,
String description) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolOnlineReviewBase.getLookupProtocol() |
ProtocolBase |
ProtocolReviewAttachmentBase.getProtocol() |
abstract ProtocolBase |
ProtocolReviewableBase.getProtocol() |
ProtocolBase |
ProtocolOnlineReviewBase.getProtocol()
Gets the protocol attribute.
|
| Modifier and Type | Method and Description |
|---|---|
protected abstract Class<? extends ProtocolBase> |
ProtocolOnlineReviewRedirectActionBase.getProtocolClass() |
| Modifier and Type | Method and Description |
|---|---|
List<CommitteeMembershipBase> |
ProtocolOnlineReviewServiceImplBase.getAvailableCommitteeMembersForCurrentSubmission(ProtocolBase protocol) |
List<CommitteeMembershipBase> |
ProtocolOnlineReviewService.getAvailableCommitteeMembersForCurrentSubmission(ProtocolBase protocol)
This method...
|
List<ProtocolOnlineReviewDocumentBase> |
ProtocolOnlineReviewServiceImplBase.getProtocolReviewDocumentsForCurrentSubmission(ProtocolBase protocol) |
List<ProtocolOnlineReviewDocumentBase> |
ProtocolOnlineReviewService.getProtocolReviewDocumentsForCurrentSubmission(ProtocolBase protocol)
Get a list of current ProtocolReview documents associated with the protocol and current submission.
|
boolean |
ProtocolOnlineReviewService.isProtocolInStateToBeReviewed(ProtocolBase protocol)
Determine if the protocol is in a state that can be reviewed.
|
void |
ProtocolOnlineReviewBase.setLookupProtocol(ProtocolBase lookupProtocol) |
void |
ProtocolReviewAttachmentBase.setProtocol(ProtocolBase protocol) |
void |
ProtocolOnlineReviewBase.setProtocol(ProtocolBase protocol)
Sets the protocol attribute value.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
PermissionsHelperBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolPersonBase.getParent() |
protected ProtocolBase |
PersonnelHelperBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolPersonnelServiceImplBase.addProtocolPerson(ProtocolBase protocol,
ProtocolPersonBase protocolPerson) |
void |
ProtocolPersonnelService.addProtocolPerson(ProtocolBase protocol,
ProtocolPersonBase protocolPerson)
This method adds ProtocolPersonBase to the List of ProtocolPersons.
|
void |
ProtocolPersonnelServiceImplBase.addProtocolPersonAttachment(ProtocolBase protocol,
ProtocolAttachmentPersonnelBase newAttachment,
int selectedPersonIndex) |
void |
ProtocolPersonnelService.addProtocolPersonAttachment(ProtocolBase protocol,
ProtocolAttachmentPersonnelBase newAttachment,
int selectedPersonIndex)
This method add ProtocolPersonAttachment to a Person of the ProtocolBase.
|
void |
ProtocolPersonnelServiceImplBase.deleteProtocolPerson(ProtocolBase protocol) |
void |
ProtocolPersonnelService.deleteProtocolPerson(ProtocolBase protocol)
This method deletes ProtocolPersonBase(s) - those marked as delete
|
void |
ProtocolPersonnelServiceImplBase.deleteProtocolPersonUnit(ProtocolBase protocol,
int selectedPersonIndex,
int lineNumber) |
void |
ProtocolPersonnelService.deleteProtocolPersonUnit(ProtocolBase protocol,
int selectedPersonIndex,
int lineNumber)
This method will delete ProtocolUnitBase from the List of protocol person units at specified position(selectedPersonIndex)
|
protected abstract void |
PersonnelHelperBase.initializeModifyProtocolPermission(ProtocolBase protocol) |
protected void |
PersonnelHelperBase.initializePermissions(ProtocolBase protocol) |
protected void |
ProtocolPersonnelServiceImplBase.populateUnitFromPrimaryDepartmentCode(ProtocolBase protocol,
ProtocolPersonBase protocolPerson) |
void |
ProtocolPersonBase.postInitHook(ProtocolBase protocol)
This method is designed to allow subclasses to perform additional initialization not performed by the final init method.
|
void |
ProtocolPersonnelServiceImplBase.setLeadUnit(ProtocolUnitBase newLeadUnit,
ProtocolPersonBase principalInvestigator,
ProtocolBase protocol)
This method sets the lead unit of the principal investigator.
|
void |
ProtocolPersonnelService.setLeadUnit(ProtocolUnitBase newLeadUnit,
ProtocolPersonBase principalInvestigator,
ProtocolBase protocol)
This method sets the lead unit of the principal investigator.
|
void |
ProtocolPersonnelService.setPrincipalInvestigator(ProtocolPersonBase newPrincipalInvestigator,
ProtocolBase protocol)
This method sets the principal investigator.
|
| Modifier and Type | Method and Description |
|---|---|
protected ProtocolBase |
ProtocolHelperBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolProposalDevelopmentDocumentService.populateDocumentOverview(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
void |
ProtocolProposalDevelopmentDocumentService.populateProposalPerson_Investigator(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
void |
ProtocolProposalDevelopmentDocumentService.populateProposalSpecialReview(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
void |
ProtocolProposalDevelopmentDocumentService.populateRequiredFields(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolActionBase |
ProposalDevelopmentProtocolDocumentServiceImplBase.getProtocolActionNewInstanceHook(ProtocolBase protocol,
ProtocolSubmissionBase protocolSubmission,
String protocolActionTypeCode) |
void |
ProtocolProposalDevelopmentDocumentServiceImplBase.populateDocumentOverview(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
void |
ProtocolProposalDevelopmentDocumentServiceImplBase.populateProposalPerson_Investigator(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
void |
ProtocolProposalDevelopmentDocumentServiceImplBase.populateProposalSpecialReview(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
protected abstract void |
ProposalDevelopmentProtocolDocumentServiceImplBase.populateProtocolSpecificFieldsHook(ProtocolBase protocol) |
void |
ProtocolProposalDevelopmentDocumentServiceImplBase.populateRequiredFields(ProtocolBase protocol,
ProposalDevelopmentDocument proposalDocument) |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolLocationServiceImplBase.addDefaultProtocolLocation(ProtocolBase protocol) |
void |
ProtocolLocationService.addDefaultProtocolLocation(ProtocolBase protocol)
This method adds a default ProtocolLocationBase to the List of ProtocolLocations.
|
void |
ProtocolLocationServiceImplBase.addProtocolLocation(ProtocolBase protocol,
ProtocolLocationBase protocolLocation) |
void |
ProtocolLocationService.addProtocolLocation(ProtocolBase protocol,
ProtocolLocationBase protocolLocation)
This method adds ProtocolLocationBase to the List of ProtocolLocations.
|
void |
ProtocolLocationServiceImplBase.clearProtocolLocationAddress(ProtocolBase protocol,
int lineNumber) |
void |
ProtocolLocationService.clearProtocolLocationAddress(ProtocolBase protocol,
int lineNumber)
This method will clear ProtocolLocationBase address from the List at specified position(lineNumber)
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolParticipantService.addProtocolParticipant(ProtocolBase protocol,
ProtocolParticipant protocolParticipant)
This method adds the ProtocolParticipant to the List of ProtocolParticipants along with the
appropriate ParticipantType.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolReferenceServiceImplBase.addProtocolReference(ProtocolBase protocol,
ProtocolReferenceBase protocolReference) |
void |
ProtocolReferenceService.addProtocolReference(ProtocolBase protocol,
ProtocolReferenceBase protocolReference)
This method adds ProtocolReferenceBase to the List of ProtocolReferences along with
appropriate ProtocolReferenceType.
|
void |
ProtocolReferenceBase.postInitHook(ProtocolBase aProtocol)
This method is designed to allow subclasses to perform additional initialization not performed by the final init method.
|
| Constructor and Description |
|---|
ProtocolReferenceBase(ProtocolReferenceBeanBase bean,
ProtocolBase protocol,
ProtocolReferenceTypeBase protocolReferenceType)
Constructs a ProtocolReferenceBase.java.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolResearchAreaServiceImplBase.addProtocolResearchArea(ProtocolBase protocol,
Collection<ResearchAreaBase> selectedBOs) |
void |
ProtocolResearchAreaService.addProtocolResearchArea(ProtocolBase protocol,
Collection<ResearchAreaBase> selectedBOs)
When a multi-lookup returns for a set of Research Areas, we must add them to the ProtocolBase Document.
|
protected ProtocolResearchAreaBase |
ProtocolResearchAreaServiceImplBase.createInstanceOfProtocolResearchAreas(ProtocolBase protocol,
ResearchAreaBase researchAreas)
This method is private helper method, to create instance of ProtocolResearchAreas and set appropriate values.
|
boolean |
ProtocolResearchAreaServiceImplBase.isEmptyProtocolResearchAreas(ProtocolBase protocol) |
boolean |
ProtocolResearchAreaService.isEmptyProtocolResearchAreas(ProtocolBase protocol)
Checks to see if the list of research areas in the given protocol is empty.
|
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolSubmissionQuestionnaireHelper.getProtocol() |
ProtocolBase |
ProtocolModuleQuestionnaireBeanBase.getProtocol() |
| Modifier and Type | Method and Description |
|---|---|
protected abstract ProtocolTaskBase |
QuestionnaireHelperBase.getModifyQnnrTaskHook(ProtocolBase protocol) |
protected abstract ProtocolModuleQuestionnaireBeanBase |
ProtocolQuestionnaireAuditRuleBase.getProtocolModuleQuestionnaireBean(ProtocolBase protocol) |
protected abstract ProtocolModuleQuestionnaireBeanBase |
QuestionnaireHelperBase.getProtocolModuleQuestionnaireBeanHook(ProtocolBase protocol) |
void |
ProtocolSubmissionQuestionnaireHelper.setProtocol(ProtocolBase protocol) |
void |
ProtocolModuleQuestionnaireBeanBase.setProtocol(ProtocolBase protocol) |
protected void |
ProtocolModuleQuestionnaireBeanBase.setProtocolSubItemCode(ProtocolBase protocol) |
| Constructor and Description |
|---|
ProtocolModuleQuestionnaireBeanBase(ProtocolBase protocol) |
ProtocolSubmissionQuestionnaireHelper(ProtocolBase protocol,
String actionTypeCode,
String submissionNumber,
boolean readOnlyView) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ProtocolSpecialReviewBase.getSequenceOwner() |
| Modifier and Type | Method and Description |
|---|---|
void |
ProtocolSpecialReviewBase.setSequenceOwner(ProtocolBase sequenceOwner) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract void |
ProtocolSpecialReviewServiceImplBase.setProtocolExemptStudiesCheckListItemHook(ProtocolBase protocol,
SpecialReview specialReview) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract Class<? extends ProtocolBase> |
QuestionnairePrintingServiceImpl.getProtocolBOClassHook() |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ResearchAreasServiceBase.getCurrentProtocolReferencingResearchArea(String researchAreaCode)
This method will return the instance of a current ProtocolBase BO, saved in the db, that references the research area with the given code.
|
ProtocolBase |
ResearchAreaCurrentReferencerHolderBase.getCurrentReferencingProtocol() |
| Constructor and Description |
|---|
ResearchAreaCurrentReferencerHolderBase(String researchAreaCode,
ProtocolBase currentReferencingProtocol,
CommitteeBase currentReferencingCommittee,
CommitteeMembershipBase currentReferencingCommitteeMembership) |
| Modifier and Type | Method and Description |
|---|---|
ProtocolBase |
ResearchAreasServiceBaseImpl.getCurrentProtocolReferencingResearchArea(String researchAreaCode) |
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