Package org.lifstools.jgoslin.domain

Klasse ElementTable

java.lang.Object

java.util.AbstractMap<K,V>

java.util.EnumMap<Element,Integer>

org.lifstools.jgoslin.domain.ElementTable

Alle implementierten Schnittstellen:

Serializable, Cloneable, Map<Element,Integer>

public final class ElementTable
extends EnumMap<Element,Integer>

Accounting table for chemical element frequency. This is used to calculate sum formulas and total masses for a given chemical element distribution, e.g. in a lipid.

Autor:

Dominik Kopczynski, Nils Hoffmann

Siehe auch:

• Serialisierte Form

Verschachtelte Klassen - Übersicht

Von Klasse geerbte verschachtelte Klassen/Schnittstellen java.util.AbstractMap

AbstractMap.SimpleEntry<K,V>, AbstractMap.SimpleImmutableEntry<K,V>

Von Schnittstelle geerbte verschachtelte Klassen/Schnittstellen java.util.Map

Map.Entry<K,V>

Konstruktorübersicht

Konstruktoren

Konstruktor	Beschreibung
ElementTable()	Create a new element table.

Methodenübersicht

Modifizierer und Typ	Methode	Beschreibung
void	add(ElementTable elements)	Add all elements and counts to those in this element table.
void	add(ElementTable elements, int multiplier)	Add all alements and counts to those in this element table, but use the count argument to multiply count values in the provided table.
ElementTable	copy()	Copy all entries in this element table.
Double	getChargedMass(int charge)	Returns the total summed mass per number of elements, corrected for charge counts * electron rest mass.
Double	getMass()	Returns the total summed mass per number of elements.
Double	getMass(Element element)	Returns the individual total mass for the provided element.
String	getSumFormula()	Returns the sum formula for all elements in this table.
static ElementTable	of(Map.Entry<Element,Integer>... entries)	Create a new element table from the provided entries.

Von Klasse geerbte Methoden java.util.EnumMap

clear, clone, containsKey, containsValue, entrySet, equals, get, hashCode, keySet, put, putAll, remove, size, values

Von Klasse geerbte Methoden java.util.AbstractMap

isEmpty, toString

Von Klasse geerbte Methoden java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Von Schnittstelle geerbte Methoden java.util.Map

compute, computeIfAbsent, computeIfPresent, forEach, getOrDefault, merge, putIfAbsent, remove, replace, replace, replaceAll

Konstruktordetails

ElementTable

public ElementTable()

Create a new element table.

Methodendetails

of

public static ElementTable of(Map.Entry<Element,Integer>... entries)

Create a new element table from the provided entries.

Parameter:

entries - the entries

Gibt zurück:

a new element table.

add

public void add(ElementTable elements)

Add all elements and counts to those in this element table.

Parameter:

elements - the table to add to this one.

add

public void add(ElementTable elements,
 int multiplier)

Add all alements and counts to those in this element table, but use the count argument to multiply count values in the provided table.

Parameter:

elements -

multiplier -

copy

public ElementTable copy()

Copy all entries in this element table. The copy will be completely independent of this instance.

Gibt zurück:

a copy of this element table.

getSumFormula

public String getSumFormula()

Returns the sum formula for all elements in this table.

Gibt zurück:

the sum formula. Returns an empty string if the table is empty.

getMass

public Double getMass(Element element)

Returns the individual total mass for the provided element.

Parameter:

element - the element to calculate the total mass for.

Gibt zurück:

the total mass for the given element, or 0.

getMass

public Double getMass()

Returns the total summed mass per number of elements.

Gibt zurück:

the total summed mass for this element table. Returns 0 if the table is empty.

getChargedMass

public Double getChargedMass(int charge)

Returns the total summed mass per number of elements, corrected for charge counts * electron rest mass.

Parameter:

charge - the charge of the molecule

Gibt zurück:

the total summed mass for this element table. Returns 0 if the table is empty.