Package org.lifstools.jgoslin.parser

Klasse FattyAcidParser

java.lang.Object

org.lifstools.jgoslin.parser.Parser<LipidAdduct>

org.lifstools.jgoslin.parser.FattyAcidParser

public final class FattyAcidParser
extends Parser<LipidAdduct>

Parser implementation for IUPAC Fatty acids nomenclature.

Autor:

Dominik Kopczynski, Nils Hoffmann

Verschachtelte Klassen - Übersicht

Von Klasse geerbte verschachtelte Klassen/Schnittstellen org.lifstools.jgoslin.parser.Parser

Parser.DPNode, Parser.ParsingErrors

Feldübersicht

Von Klasse geerbte Felder org.lifstools.jgoslin.parser.Parser

avgPair, DEFAULT_QUOTE, EOF_RULE, EOF_RULE_NAME, EOF_SIGN, grammarName, MASK, nextFreeRuleIndex, NTtoNT, NTtoRule, originalTtoNT, quote, rightPair, RULE_ASSIGNMENT, RULE_SEPARATOR, RULE_TERMINAL, ruleToNT, SHIFT, START_RULE, substitution, TtoNT, usedEof

Konstruktorübersicht

Konstruktoren

Konstruktor	Beschreibung
FattyAcidParser()	Create a new instance of a FattyAcidParser with default grammar DEFAULT_GRAMMAR and default quote StringFunctions.DEFAULT_QUOTE and default KnownFunctionalGroups.
FattyAcidParser(KnownFunctionalGroups knownFunctionalGroups)	Create a new instance of a FattyAcidParser with default grammar DEFAULT_GRAMMAR and default quote StringFunctions.DEFAULT_QUOTE.
FattyAcidParser(KnownFunctionalGroups knownFunctionalGroups, String grammarContent, char quote)	Create a new instance of a FattyAcidParser.

Methodenübersicht

Modifizierer und Typ	Methode	Beschreibung
FattyAcidParserEventHandler	newEventHandler()
LipidAdduct	parse(String text, BaseParserEventHandler eventHandler)	Parse the given text, constructing the output object of type T using the provided parser event handler.
LipidAdduct	parse(String text, BaseParserEventHandler eventHandler, boolean with_exception)	Parse the given text, constructing the output object of type T using the provided parser event handler.Allows the user to specify, if exceptions should be thrown on errors.

Von Klasse geerbte Methoden org.lifstools.jgoslin.parser.Parser

add_terminal, collect_backwards, collect_backwards, collect_one_backwards, compute_rule_key, de_escape, extract_text_based_rules, fill_tree, get_next_free_rule_index, is_terminal, parse_regular, raise_events, readGrammar, top_nodes

Von Klasse geerbte Methoden java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Konstruktordetails

FattyAcidParser

public FattyAcidParser(KnownFunctionalGroups knownFunctionalGroups,
 String grammarContent,
 char quote)

Create a new instance of a FattyAcidParser.

Parameter:

knownFunctionalGroups - the known functional groups

grammarContent - the grammar text content

quote - the quotation character used in the grammar

FattyAcidParser

public FattyAcidParser(KnownFunctionalGroups knownFunctionalGroups)

Create a new instance of a FattyAcidParser with default grammar DEFAULT_GRAMMAR and default quote StringFunctions.DEFAULT_QUOTE.

Parameter:

knownFunctionalGroups - the known functional groups

FattyAcidParser

public FattyAcidParser()

Create a new instance of a FattyAcidParser with default grammar DEFAULT_GRAMMAR and default quote StringFunctions.DEFAULT_QUOTE and default KnownFunctionalGroups.

Methodendetails

parse

public LipidAdduct parse(String text,
 BaseParserEventHandler eventHandler)

Beschreibung aus Klasse kopiert: Parser

Parse the given text, constructing the output object of type T using the provided parser event handler.

Setzt außer Kraft:

parse in Klasse Parser<LipidAdduct>

Parameter:

text - the text to parse.

eventHandler - the parser event handler to process events created by the parser.

Gibt zurück:

the parsed object of type T if successful, otherwise an exception will be thrown.

parse

public LipidAdduct parse(String text,
 BaseParserEventHandler eventHandler,
 boolean with_exception)

Beschreibung aus Klasse kopiert: Parser

Parse the given text, constructing the output object of type T using the provided parser event handler.Allows the user to specify, if exceptions should be thrown on errors.

Setzt außer Kraft:

parse in Klasse Parser<LipidAdduct>

Parameter:

text - the text to parse.

eventHandler - the parser event handler to process events created by the parser.

with_exception - if true, throws exception if parsing was not successful.

Gibt zurück:

the parsed object of type T if successful, otherwise null, if throwError is false.

newEventHandler

public FattyAcidParserEventHandler newEventHandler()

Angegeben von:

newEventHandler in Klasse Parser<LipidAdduct>