Package org.lifstools.jgoslin.parser

Klasse ShorthandParserEventHandler

java.lang.Object

org.lifstools.jgoslin.parser.BaseParserEventHandler<LipidAdduct>

org.lifstools.jgoslin.parser.LipidBaseParserEventHandler

org.lifstools.jgoslin.parser.ShorthandParserEventHandler

public class ShorthandParserEventHandler
extends LipidBaseParserEventHandler

Event handler implementation for the ShorthandParser.

Autor:

Dominik Kopczynski, Nils Hoffmann

Feldübersicht

Von Klasse geerbte Felder org.lifstools.jgoslin.parser.LipidBaseParserEventHandler

adduct, currentFa, faList, headGroup, headgroupDecorators, knownFunctionalGroups, lcb, level, SP_EXCEPTION_CLASSES, useHeadGroup

Von Klasse geerbte Felder org.lifstools.jgoslin.parser.BaseParserEventHandler

content, errorMessage, registeredEvents, ruleNames

Konstruktorübersicht

Konstruktoren

Konstruktor	Beschreibung
ShorthandParserEventHandler(KnownFunctionalGroups knownFunctionalGroups)	Create a new ShorthandParserEventHandler.

Methodenübersicht

Modifizierer und Typ	Methode	Beschreibung
protected void	resetParser(TreeNode node)

Von Klasse geerbte Methoden org.lifstools.jgoslin.parser.LipidBaseParserEventHandler

assembleLipid, check_full_structure, prepareHeadgroupAndChecks, prepareHeadgroupAndChecks, resolveFaSynonym, setLipidLevel, spRegularLcb

Von Klasse geerbte Methoden org.lifstools.jgoslin.parser.BaseParserEventHandler

getErrorMessage, handleEvent, sanityCheck

Von Klasse geerbte Methoden java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Konstruktordetails

ShorthandParserEventHandler

public ShorthandParserEventHandler(KnownFunctionalGroups knownFunctionalGroups)

Create a new ShorthandParserEventHandler.

Parameter:

knownFunctionalGroups - the known functional groups

Methodendetails

resetParser

protected void resetParser(TreeNode node)

Angegeben von:

resetParser in Klasse BaseParserEventHandler<LipidAdduct>