org.molgenis.omx.ngs
Class Flowcell

java.lang.Object
  org.molgenis.util.AbstractEntity
      org.molgenis.omx.ngs.Flowcell

All Implemented Interfaces:

Serializable, Autoid, Entity

@Entity
public class Flowcell
extends AbstractEntity
implements Autoid

Flowcell: .

Author:

MOLGENIS generator

See Also:

Serialized Form

Field Summary

static String	FLOWCELLDIRECTION
static String	FLOWCELLNAME
static String	ID
static String	MACHINE
static String	MACHINE_MACHINENAME
static String	RUN
static String	RUNDATE

Constructor Summary

Flowcell()

Flowcell(Flowcell copyMe)
copy constructor

Method Summary

Flowcell	create(Tuple tuple)
boolean	equals(Object obj)
static List<? extends Flowcell>	find(Database db, QueryRule... rules) Shorthand for db.find(Flowcell.class, org.molgenis.framework.db.QueryRule ...
static Flowcell	findByFlowcellName(Database db, String flowcellName)
static Flowcell	findById(Database db, Integer id)
Object	get(String name) Generic getter.
Vector<String>	getFields()
Vector<String>	getFields(boolean skipAutoIds) Get the names of all public properties of Flowcell.
String	getFields(String sep) Deprecated.
String	getFlowcellDirection() Get the The direction used to read sequences.
String	getFlowcellDirection(Database db) Deprecated.
String	getFlowcellDirectionLabel() Get tha label for enum FlowcellDirection.
List<ValueLabel>	getFlowcellDirectionOptions() FlowcellDirection is enum.
String	getFlowcellName() Get the The unique name of a flowcell.
String	getFlowcellName(Database db) Deprecated.
Integer	getId() Get the automatically generated internal id, only for internal use..
String	getIdField()
Object	getIdValue()
List<String>	getLabelFields()
Integer	getMachine_Id()
String	getMachine_MachineName() Get a pretty label MachineName for cross reference Machine to Machine.Id.
Machine	getMachine() Get the The machine used for sequencing.
Machine	getMachine(Database db) Deprecated.
String	getRun() Get the The run number always use 4 digits (with leading 0's).
String	getRun(Database db) Deprecated.
Date	getRunDate() Get the The date the flowcell was run on the machine..
Date	getRunDate(Database db) Deprecated.
String	getValues(String sep) Deprecated.
String	getXrefIdFieldName(String fieldName)
int	hashCode()
static Query<? extends Flowcell>	query(Database db) Shorthand for db.query(Flowcell.class).
void	set(Tuple tuple, boolean strict)
void	setFlowcellDirection(String flowcellDirection) Set the The direction used to read sequences.
void	setFlowcellName(String flowcellName) Set the The unique name of a flowcell.
void	setId(Integer id) Set the automatically generated internal id, only for internal use..
void	setMachine_Id(Integer machine_id) Set foreign key for field machine.
void	setMachine_MachineName(String machine_MachineName) Set a pretty label for cross reference Machine to Machine.Id.
void	setMachine(Integer machine_id)
void	setMachine(Machine machine) Set the The machine used for sequencing.
void	setRun(String run) Set the The run number always use 4 digits (with leading 0's).
void	setRunDate(Date runDate) Set the The date the flowcell was run on the machine..
String	toString()
String	toString(boolean verbose)
void	validate()

Methods inherited from class org.molgenis.util.AbstractEntity

get__Type, get__TypeLabel, get__TypeOptions, getLabelValue, getValues, isObjectRepresentation, isReadonly, set__Type, set, set, setReadonly, setValuesFromString, string2date

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.molgenis.util.Entity

getLabelValue, getValues, isReadonly, set, set, setReadonly

Field Detail

ID

public static final String ID

See Also:

Constant Field Values

FLOWCELLDIRECTION

public static final String FLOWCELLDIRECTION

See Also:

Constant Field Values

FLOWCELLNAME

public static final String FLOWCELLNAME

See Also:

Constant Field Values

MACHINE

public static final String MACHINE

See Also:

Constant Field Values

MACHINE_MACHINENAME

public static final String MACHINE_MACHINENAME

See Also:

Constant Field Values

RUN

public static final String RUN

See Also:

Constant Field Values

RUNDATE

public static final String RUNDATE

See Also:

Constant Field Values

Constructor Detail

Flowcell

public Flowcell()

Flowcell

public Flowcell(Flowcell copyMe)
         throws Exception

copy constructor

Throws:

Exception

Method Detail

query

public static Query<? extends Flowcell> query(Database db)

Shorthand for db.query(Flowcell.class).

find

public static List<? extends Flowcell> find(Database db,
                                            QueryRule... rules)
                                     throws DatabaseException

Shorthand for db.find(Flowcell.class, org.molgenis.framework.db.QueryRule ... rules).

Throws:

DatabaseException

findById

public static Flowcell findById(Database db,
                                Integer id)
                         throws DatabaseException

Throws:

DatabaseException

findByFlowcellName

public static Flowcell findByFlowcellName(Database db,
                                          String flowcellName)
                                   throws DatabaseException

Throws:

DatabaseException

getId

public Integer getId()

Get the automatically generated internal id, only for internal use..

Specified by:

getId in interface Autoid

Returns:

id.

setId

public void setId(Integer id)

Set the automatically generated internal id, only for internal use..

Specified by:

setId in interface Autoid

Parameters:

id -

getFlowcellDirection

public String getFlowcellDirection()

Get the The direction used to read sequences.

Returns:

flowcellDirection.

getFlowcellDirection

@Deprecated
public String getFlowcellDirection(Database db)

Deprecated.

setFlowcellDirection

public void setFlowcellDirection(String flowcellDirection)

Set the The direction used to read sequences.

Parameters:

flowcellDirection -

getFlowcellDirectionLabel

public String getFlowcellDirectionLabel()

Get tha label for enum FlowcellDirection.

getFlowcellDirectionOptions

public List<ValueLabel> getFlowcellDirectionOptions()

FlowcellDirection is enum. This method returns all available enum options.

getFlowcellName

public String getFlowcellName()

Get the The unique name of a flowcell.

Returns:

flowcellName.

getFlowcellName

@Deprecated
public String getFlowcellName(Database db)

Deprecated.

setFlowcellName

public void setFlowcellName(String flowcellName)

Set the The unique name of a flowcell.

Parameters:

flowcellName -

getMachine

public Machine getMachine()

Get the The machine used for sequencing.

Returns:

machine.

getMachine

@Deprecated
public Machine getMachine(Database db)

Deprecated.

setMachine

public void setMachine(Machine machine)

Set the The machine used for sequencing.

Parameters:

machine -

setMachine_Id

public void setMachine_Id(Integer machine_id)

Set foreign key for field machine. This will erase any foreign key objects currently set. FIXME: can we autoload the new object?

setMachine

public void setMachine(Integer machine_id)

getMachine_Id

public Integer getMachine_Id()

getMachine_MachineName

public String getMachine_MachineName()

Get a pretty label MachineName for cross reference Machine to Machine.Id.

setMachine_MachineName

public void setMachine_MachineName(String machine_MachineName)

Set a pretty label for cross reference Machine to Machine.Id. Implies setMachine(null) until save

getRun

public String getRun()

Get the The run number always use 4 digits (with leading 0's).

Returns:

run.

getRun

@Deprecated
public String getRun(Database db)

Deprecated.

setRun

public void setRun(String run)

Set the The run number always use 4 digits (with leading 0's).

Parameters:

run -

getRunDate

public Date getRunDate()

Get the The date the flowcell was run on the machine..

Returns:

runDate.

getRunDate

@Deprecated
public Date getRunDate(Database db)

Deprecated.

setRunDate

public void setRunDate(Date runDate)

Set the The date the flowcell was run on the machine..

Parameters:

runDate -

get

public Object get(String name)

Generic getter. Get the property by using the name.

Specified by:

get in interface Entity

validate

public void validate()
              throws DatabaseException

Specified by:

validate in interface Entity

Throws:

DatabaseException

set

public void set(Tuple tuple,
                boolean strict)
         throws Exception

Specified by:

set in interface Entity

Throws:

Exception

toString

public String toString()

Overrides:

toString in class Object

toString

public String toString(boolean verbose)

getFields

public Vector<String> getFields(boolean skipAutoIds)

Get the names of all public properties of Flowcell.

Specified by:

getFields in interface Entity

getFields

public Vector<String> getFields()

Specified by:

getFields in interface Entity

getIdField

public String getIdField()

Specified by:

getIdField in interface Entity

getLabelFields

public List<String> getLabelFields()

Specified by:

getLabelFields in interface Entity

getFields

@Deprecated
public String getFields(String sep)

Deprecated.

Specified by:

getFields in interface Entity

getIdValue

public Object getIdValue()

Specified by:

getIdValue in interface Entity

getXrefIdFieldName

public String getXrefIdFieldName(String fieldName)

Specified by:

getXrefIdFieldName in interface Entity

getValues

@Deprecated
public String getValues(String sep)

Deprecated.

Specified by:

getValues in interface Entity

Overrides:

getValues in class AbstractEntity

create

public Flowcell create(Tuple tuple)
                throws Exception

Specified by:

create in interface Entity

Throws:

Exception

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object