org.molgenis.omx.ngs.db
Class FlowcellSecurityDecorator<E extends Flowcell>

java.lang.Object
  org.molgenis.framework.db.MapperDecorator<E>
      org.molgenis.omx.ngs.db.FlowcellSecurityDecorator<E>

All Implemented Interfaces:

Mapper<E>

public class FlowcellSecurityDecorator<E extends Flowcell>
extends MapperDecorator<E>

TODO add column level security filters

Constructor Summary

FlowcellSecurityDecorator(Mapper<E> generatedMapper)

Method Summary

int	add(List<E> entities)
int	add(TupleReader reader, TupleWriter writer)
int	count(QueryRule... rules)
String	createFindSqlInclRules(QueryRule[] rules)
int	executeAdd(List<? extends E> entities)
int	executeRemove(List<? extends E> entities)
int	executeUpdate(List<? extends E> entities)
List<E>	find(QueryRule... rules)
void	find(TupleWriter writer, List<String> fieldsToExport, QueryRule[] rules)
void	find(TupleWriter writer, QueryRule... rules)
E	findById(Object id)
int	remove(List<E> entities)
int	remove(TupleReader reader)
void	resolveForeignKeys(List<E> entities)
List<E>	toList(TupleReader reader, int limit)
int	update(List<E> entities)
int	update(TupleReader reader)

Methods inherited from class org.molgenis.framework.db.MapperDecorator

create, createList, getDatabase, getFieldType, getTableFieldName

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FlowcellSecurityDecorator

public FlowcellSecurityDecorator(Mapper<E> generatedMapper)

Method Detail

add

public int add(List<E> entities)
        throws DatabaseException

Specified by:

add in interface Mapper<E extends Flowcell>

Overrides:

add in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

update

public int update(List<E> entities)
           throws DatabaseException

Specified by:

update in interface Mapper<E extends Flowcell>

Overrides:

update in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

remove

public int remove(List<E> entities)
           throws DatabaseException

Specified by:

remove in interface Mapper<E extends Flowcell>

Overrides:

remove in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

add

public int add(TupleReader reader,
               TupleWriter writer)
        throws DatabaseException

Specified by:

add in interface Mapper<E extends Flowcell>

Overrides:

add in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

count

public int count(QueryRule... rules)
          throws DatabaseException

Specified by:

count in interface Mapper<E extends Flowcell>

Overrides:

count in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

find

public List<E> find(QueryRule... rules)
                              throws DatabaseException

Specified by:

find in interface Mapper<E extends Flowcell>

Overrides:

find in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

find

public void find(TupleWriter writer,
                 QueryRule... rules)
          throws DatabaseException

Specified by:

find in interface Mapper<E extends Flowcell>

Overrides:

find in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

findById

public E findById(Object id)
                            throws DatabaseException

Specified by:

findById in interface Mapper<E extends Flowcell>

Overrides:

findById in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

remove

public int remove(TupleReader reader)
           throws DatabaseException

Specified by:

remove in interface Mapper<E extends Flowcell>

Overrides:

remove in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

update

public int update(TupleReader reader)
           throws DatabaseException

Specified by:

update in interface Mapper<E extends Flowcell>

Overrides:

update in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

find

public void find(TupleWriter writer,
                 List<String> fieldsToExport,
                 QueryRule[] rules)
          throws DatabaseException

Specified by:

find in interface Mapper<E extends Flowcell>

Overrides:

find in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

executeAdd

public int executeAdd(List<? extends E> entities)
               throws DatabaseException

Specified by:

executeAdd in interface Mapper<E extends Flowcell>

Overrides:

executeAdd in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

executeUpdate

public int executeUpdate(List<? extends E> entities)
                  throws DatabaseException

Specified by:

executeUpdate in interface Mapper<E extends Flowcell>

Overrides:

executeUpdate in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

executeRemove

public int executeRemove(List<? extends E> entities)
                  throws DatabaseException

Specified by:

executeRemove in interface Mapper<E extends Flowcell>

Overrides:

executeRemove in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

resolveForeignKeys

public void resolveForeignKeys(List<E> entities)
                        throws ParseException,
                               DatabaseException

Specified by:

resolveForeignKeys in interface Mapper<E extends Flowcell>

Overrides:

resolveForeignKeys in class MapperDecorator<E extends Flowcell>

Throws:

ParseException

DatabaseException

toList

public List<E> toList(TupleReader reader,
                      int limit)
                                throws DatabaseException

Specified by:

toList in interface Mapper<E extends Flowcell>

Overrides:

toList in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException

createFindSqlInclRules

public String createFindSqlInclRules(QueryRule[] rules)
                              throws DatabaseException

Specified by:

createFindSqlInclRules in interface Mapper<E extends Flowcell>

Overrides:

createFindSqlInclRules in class MapperDecorator<E extends Flowcell>

Throws:

DatabaseException