org.molgenis.controller

Class DataSetController

java.lang.Object

org.molgenis.controller.DataSetController

@Lazy
@Controller
@RequestMapping(value="/api/v1/dataset")
public class DataSetController
extends Object

Constructor Summary

Constructors

Constructor and Description
DataSetController()

Method Summary

Methods

Modifier and Type	Method and Description
void	binder(org.springframework.web.bind.WebDataBinder binder)
org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse>	createDataSet(org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse>	createDataSetFromForm(org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
void	deleteDataSet(Integer id)
void	deleteDataSetPost(Integer id)
ErrorMessageResponse	handleDatabaseAccessException(DatabaseAccessException e)
ErrorMessageResponse	handleDatabaseException(DatabaseException e)
ErrorMessageResponse	handleEntityNotFoundException(EntityNotFoundException e)
ErrorMessageResponse	handleRuntimeException(RuntimeException e)
org.molgenis.controller.DataSetController.DataSetResponse	retrieveDataSet(Integer id, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse>	retrieveDataSetCollection(EntityCollectionRequest dataSetCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse>	retrieveDataSetCollectionJson(EntityCollectionRequest dataSetCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse>	retrieveDataSetCollectionJsonPost(EntityCollectionRequest dataSetCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse>	retrieveDataSetCollectionPost(EntityCollectionRequest dataSetCollectionRequest, String... expandFields)
org.molgenis.controller.DataSetController.DataSetResponse	retrieveDataSetJson(Integer id, String... expandFields)
String	retrieveDataSetXrefProtocolUsed(Integer id, String... expandFields)
String	retrieveDataSetXrefProtocolUsedJson(Integer id, String... expandFields)
void	updateDataSet(Integer id, org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse>	updateDataSetFromForm(Integer id, String _method, org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
void	updateDataSetFromFormPost(Integer id, org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
void	updateDataSetPost(Integer id, org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DataSetController

public DataSetController()

Method Detail

createDataSet

@RequestMapping(method=POST)
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse> createDataSet(@RequestBody
                                                                                                                                           org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                                                                                                                 throws DatabaseException

Throws:

DatabaseException

createDataSetFromForm

@RequestMapping(method=POST,
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse> createDataSetFromForm(@ModelAttribute
                                                                                                                                                   org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                                                                                                                         throws DatabaseException

Throws:

DatabaseException

retrieveDataSet

@RequestMapping(value="/{id}",
                method=GET)
@ResponseBody
public org.molgenis.controller.DataSetController.DataSetResponse retrieveDataSet(@PathVariable
                                                                                                    Integer id,
                                                                                                    @RequestParam(value="expand",required=false)
                                                                                                    String... expandFields)
                                                                          throws DatabaseException

Throws:

DatabaseException

retrieveDataSetJson

@RequestMapping(value="/{id}",
                method=GET,
                params="format=json",
                produces="application/json")
@ResponseBody
public org.molgenis.controller.DataSetController.DataSetResponse retrieveDataSetJson(@PathVariable
                                                                                                        Integer id,
                                                                                                        @RequestParam(value="expand",required=false)
                                                                                                        String... expandFields)
                                                                              throws DatabaseException

Throws:

DatabaseException

binder

@InitBinder
public void binder(org.springframework.web.bind.WebDataBinder binder)

retrieveDataSetXrefProtocolUsed

@RequestMapping(value="/{id}/protocolUsed",
                method=GET)
public String retrieveDataSetXrefProtocolUsed(@PathVariable
                                                    Integer id,
                                                    @RequestParam(value="expand",required=false)
                                                    String... expandFields)
                                       throws DatabaseException

Throws:

DatabaseException

retrieveDataSetXrefProtocolUsedJson

@RequestMapping(value="/{id}/protocolUsed",
                method=GET,
                params="format=json",
                produces="application/json")
public String retrieveDataSetXrefProtocolUsedJson(@PathVariable
                                                        Integer id,
                                                        @RequestParam(value="expand",required=false)
                                                        String... expandFields)
                                           throws DatabaseException

Throws:

DatabaseException

updateDataSet

@RequestMapping(value="/{id}",
                method=PUT)
@ResponseStatus(value=OK)
public void updateDataSet(@PathVariable
                                               Integer id,
                                               @RequestBody
                                               org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                   throws DatabaseException

Throws:

DatabaseException

updateDataSetFromForm

@RequestMapping(value="/{id}",
                method=PUT,
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.DataSetController.DataSetResponse> updateDataSetFromForm(@PathVariable
                                                                                                                                                   Integer id,
                                                                                                                                                   @PathVariable
                                                                                                                                                   String _method,
                                                                                                                                                   @ModelAttribute
                                                                                                                                                   org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                                                                                                                         throws DatabaseException

Throws:

DatabaseException

updateDataSetPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=PUT")
@ResponseStatus(value=NO_CONTENT)
public void updateDataSetPost(@PathVariable
                                                   Integer id,
                                                   @RequestBody
                                                   org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                       throws DatabaseException

Throws:

DatabaseException

updateDataSetFromFormPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=PUT",
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseStatus(value=NO_CONTENT)
public void updateDataSetFromFormPost(@PathVariable
                                                           Integer id,
                                                           @ModelAttribute
                                                           org.molgenis.controller.DataSetController.DataSetRequest dataSetRequest)
                               throws DatabaseException

Throws:

DatabaseException

deleteDataSet

@RequestMapping(value="/{id}",
                method=DELETE)
@ResponseStatus(value=NO_CONTENT)
public void deleteDataSet(@PathVariable
                                               Integer id)
                   throws DatabaseException

Throws:

DatabaseException

deleteDataSetPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=DELETE")
@ResponseStatus(value=NO_CONTENT)
public void deleteDataSetPost(@PathVariable
                                                   Integer id)
                       throws DatabaseException

Throws:

DatabaseException

retrieveDataSetCollection

@RequestMapping(method=GET)
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse> retrieveDataSetCollection(EntityCollectionRequest dataSetCollectionRequest,
                                                                                                                                        @RequestParam(value="expand",required=false)
                                                                                                                                        String... expandFields)
                                                                                                              throws DatabaseException

Throws:

DatabaseException

retrieveDataSetCollectionJson

@RequestMapping(method=GET,
                params="format=json",
                produces="application/json")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse> retrieveDataSetCollectionJson(EntityCollectionRequest dataSetCollectionRequest,
                                                                                                                                            @RequestParam(value="expand",required=false)
                                                                                                                                            String... expandFields)
                                                                                                                  throws DatabaseException

Throws:

DatabaseException

retrieveDataSetCollectionPost

@RequestMapping(method=POST,
                params="_method=GET")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse> retrieveDataSetCollectionPost(@RequestBody
                                                                                                                                            EntityCollectionRequest dataSetCollectionRequest,
                                                                                                                                            @RequestParam(value="expand",required=false)
                                                                                                                                            String... expandFields)
                                                                                                                  throws DatabaseException

Throws:

DatabaseException

retrieveDataSetCollectionJsonPost

@RequestMapping(method=POST,
                params={"_method=GET","format=json"},
                produces="application/json")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.DataSetController.DataSetResponse> retrieveDataSetCollectionJsonPost(@RequestBody
                                                                                                                                                EntityCollectionRequest dataSetCollectionRequest,
                                                                                                                                                @RequestParam(value="expand",required=false)
                                                                                                                                                String... expandFields)
                                                                                                                      throws DatabaseException

Throws:

DatabaseException

handleEntityNotFoundException

@ExceptionHandler(value=org.molgenis.framework.db.EntityNotFoundException.class)
@ResponseStatus(value=NOT_FOUND)
@ResponseBody
public ErrorMessageResponse handleEntityNotFoundException(EntityNotFoundException e)

handleDatabaseException

@ExceptionHandler(value=org.molgenis.framework.db.DatabaseException.class)
@ResponseStatus(value=INTERNAL_SERVER_ERROR)
@ResponseBody
public ErrorMessageResponse handleDatabaseException(DatabaseException e)

handleDatabaseAccessException

@ExceptionHandler(value=org.molgenis.framework.db.DatabaseAccessException.class)
@ResponseStatus(value=UNAUTHORIZED)
@ResponseBody
public ErrorMessageResponse handleDatabaseAccessException(DatabaseAccessException e)

handleRuntimeException

@ExceptionHandler(value=java.lang.RuntimeException.class)
@ResponseStatus(value=INTERNAL_SERVER_ERROR)
@ResponseBody
public ErrorMessageResponse handleRuntimeException(RuntimeException e)