org.molgenis.controller

Class PatientController

java.lang.Object

org.molgenis.controller.PatientController

@Lazy
@Controller
@RequestMapping(value="/api/v1/patient")
public class PatientController
extends Object

Constructor Summary

Constructors

Constructor and Description
PatientController()

Method Summary

Methods

Modifier and Type	Method and Description
void	binder(org.springframework.web.bind.WebDataBinder binder)
org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse>	createPatient(org.molgenis.controller.PatientController.PatientRequest patientRequest)
org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse>	createPatientFromForm(org.molgenis.controller.PatientController.PatientRequest patientRequest)
void	deletePatient(Integer id)
void	deletePatientPost(Integer id)
ErrorMessageResponse	handleDatabaseAccessException(DatabaseAccessException e)
ErrorMessageResponse	handleDatabaseException(DatabaseException e)
ErrorMessageResponse	handleEntityNotFoundException(EntityNotFoundException e)
ErrorMessageResponse	handleRuntimeException(RuntimeException e)
org.molgenis.controller.PatientController.PatientResponse	retrievePatient(Integer id, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse>	retrievePatientCollection(EntityCollectionRequest patientCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse>	retrievePatientCollectionJson(EntityCollectionRequest patientCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse>	retrievePatientCollectionJsonPost(EntityCollectionRequest patientCollectionRequest, String... expandFields)
EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse>	retrievePatientCollectionPost(EntityCollectionRequest patientCollectionRequest, String... expandFields)
org.molgenis.controller.PatientController.PatientResponse	retrievePatientJson(Integer id, String... expandFields)
String	retrievePatientXrefAllele1(Integer id, String... expandFields)
String	retrievePatientXrefAllele1Json(Integer id, String... expandFields)
String	retrievePatientXrefAllele2(Integer id, String... expandFields)
String	retrievePatientXrefAllele2Json(Integer id, String... expandFields)
String	retrievePatientXrefFather(Integer id, String... expandFields)
String	retrievePatientXrefFatherJson(Integer id, String... expandFields)
String	retrievePatientXrefMother(Integer id, String... expandFields)
String	retrievePatientXrefMotherJson(Integer id, String... expandFields)
void	updatePatient(Integer id, org.molgenis.controller.PatientController.PatientRequest patientRequest)
org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse>	updatePatientFromForm(Integer id, String _method, org.molgenis.controller.PatientController.PatientRequest patientRequest)
void	updatePatientFromFormPost(Integer id, org.molgenis.controller.PatientController.PatientRequest patientRequest)
void	updatePatientPost(Integer id, org.molgenis.controller.PatientController.PatientRequest patientRequest)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PatientController

public PatientController()

Method Detail

createPatient

@RequestMapping(method=POST)
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse> createPatient(@RequestBody
                                                                                                                                           org.molgenis.controller.PatientController.PatientRequest patientRequest)
                                                                                                                 throws DatabaseException

Throws:

DatabaseException

createPatientFromForm

@RequestMapping(method=POST,
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse> createPatientFromForm(@ModelAttribute
                                                                                                                                                   org.molgenis.controller.PatientController.PatientRequest patientRequest)
                                                                                                                         throws DatabaseException

Throws:

DatabaseException

retrievePatient

@RequestMapping(value="/{id}",
                method=GET)
@ResponseBody
public org.molgenis.controller.PatientController.PatientResponse retrievePatient(@PathVariable
                                                                                                    Integer id,
                                                                                                    @RequestParam(value="expand",required=false)
                                                                                                    String... expandFields)
                                                                          throws DatabaseException

Throws:

DatabaseException

retrievePatientJson

@RequestMapping(value="/{id}",
                method=GET,
                params="format=json",
                produces="application/json")
@ResponseBody
public org.molgenis.controller.PatientController.PatientResponse retrievePatientJson(@PathVariable
                                                                                                        Integer id,
                                                                                                        @RequestParam(value="expand",required=false)
                                                                                                        String... expandFields)
                                                                              throws DatabaseException

Throws:

DatabaseException

binder

@InitBinder
public void binder(org.springframework.web.bind.WebDataBinder binder)

retrievePatientXrefMother

@RequestMapping(value="/{id}/mother",
                method=GET)
public String retrievePatientXrefMother(@PathVariable
                                              Integer id,
                                              @RequestParam(value="expand",required=false)
                                              String... expandFields)
                                 throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefMotherJson

@RequestMapping(value="/{id}/mother",
                method=GET,
                params="format=json",
                produces="application/json")
public String retrievePatientXrefMotherJson(@PathVariable
                                                  Integer id,
                                                  @RequestParam(value="expand",required=false)
                                                  String... expandFields)
                                     throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefFather

@RequestMapping(value="/{id}/father",
                method=GET)
public String retrievePatientXrefFather(@PathVariable
                                              Integer id,
                                              @RequestParam(value="expand",required=false)
                                              String... expandFields)
                                 throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefFatherJson

@RequestMapping(value="/{id}/father",
                method=GET,
                params="format=json",
                produces="application/json")
public String retrievePatientXrefFatherJson(@PathVariable
                                                  Integer id,
                                                  @RequestParam(value="expand",required=false)
                                                  String... expandFields)
                                     throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefAllele1

@RequestMapping(value="/{id}/allele1",
                method=GET)
public String retrievePatientXrefAllele1(@PathVariable
                                               Integer id,
                                               @RequestParam(value="expand",required=false)
                                               String... expandFields)
                                  throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefAllele1Json

@RequestMapping(value="/{id}/allele1",
                method=GET,
                params="format=json",
                produces="application/json")
public String retrievePatientXrefAllele1Json(@PathVariable
                                                   Integer id,
                                                   @RequestParam(value="expand",required=false)
                                                   String... expandFields)
                                      throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefAllele2

@RequestMapping(value="/{id}/allele2",
                method=GET)
public String retrievePatientXrefAllele2(@PathVariable
                                               Integer id,
                                               @RequestParam(value="expand",required=false)
                                               String... expandFields)
                                  throws DatabaseException

Throws:

DatabaseException

retrievePatientXrefAllele2Json

@RequestMapping(value="/{id}/allele2",
                method=GET,
                params="format=json",
                produces="application/json")
public String retrievePatientXrefAllele2Json(@PathVariable
                                                   Integer id,
                                                   @RequestParam(value="expand",required=false)
                                                   String... expandFields)
                                      throws DatabaseException

Throws:

DatabaseException

updatePatient

@RequestMapping(value="/{id}",
                method=PUT)
@ResponseStatus(value=OK)
public void updatePatient(@PathVariable
                                               Integer id,
                                               @RequestBody
                                               org.molgenis.controller.PatientController.PatientRequest patientRequest)
                   throws DatabaseException

Throws:

DatabaseException

updatePatientFromForm

@RequestMapping(value="/{id}",
                method=PUT,
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseBody
public org.springframework.http.ResponseEntity<org.molgenis.controller.PatientController.PatientResponse> updatePatientFromForm(@PathVariable
                                                                                                                                                   Integer id,
                                                                                                                                                   @PathVariable
                                                                                                                                                   String _method,
                                                                                                                                                   @ModelAttribute
                                                                                                                                                   org.molgenis.controller.PatientController.PatientRequest patientRequest)
                                                                                                                         throws DatabaseException

Throws:

DatabaseException

updatePatientPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=PUT")
@ResponseStatus(value=NO_CONTENT)
public void updatePatientPost(@PathVariable
                                                   Integer id,
                                                   @RequestBody
                                                   org.molgenis.controller.PatientController.PatientRequest patientRequest)
                       throws DatabaseException

Throws:

DatabaseException

updatePatientFromFormPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=PUT",
                headers="Content-Type=application/x-www-form-urlencoded")
@ResponseStatus(value=NO_CONTENT)
public void updatePatientFromFormPost(@PathVariable
                                                           Integer id,
                                                           @ModelAttribute
                                                           org.molgenis.controller.PatientController.PatientRequest patientRequest)
                               throws DatabaseException

Throws:

DatabaseException

deletePatient

@RequestMapping(value="/{id}",
                method=DELETE)
@ResponseStatus(value=NO_CONTENT)
public void deletePatient(@PathVariable
                                               Integer id)
                   throws DatabaseException

Throws:

DatabaseException

deletePatientPost

@RequestMapping(value="/{id}",
                method=POST,
                params="_method=DELETE")
@ResponseStatus(value=NO_CONTENT)
public void deletePatientPost(@PathVariable
                                                   Integer id)
                       throws DatabaseException

Throws:

DatabaseException

retrievePatientCollection

@RequestMapping(method=GET)
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse> retrievePatientCollection(EntityCollectionRequest patientCollectionRequest,
                                                                                                                                        @RequestParam(value="expand",required=false)
                                                                                                                                        String... expandFields)
                                                                                                              throws DatabaseException

Throws:

DatabaseException

retrievePatientCollectionJson

@RequestMapping(method=GET,
                params="format=json",
                produces="application/json")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse> retrievePatientCollectionJson(EntityCollectionRequest patientCollectionRequest,
                                                                                                                                            @RequestParam(value="expand",required=false)
                                                                                                                                            String... expandFields)
                                                                                                                  throws DatabaseException

Throws:

DatabaseException

retrievePatientCollectionPost

@RequestMapping(method=POST,
                params="_method=GET")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse> retrievePatientCollectionPost(@RequestBody
                                                                                                                                            EntityCollectionRequest patientCollectionRequest,
                                                                                                                                            @RequestParam(value="expand",required=false)
                                                                                                                                            String... expandFields)
                                                                                                                  throws DatabaseException

Throws:

DatabaseException

retrievePatientCollectionJsonPost

@RequestMapping(method=POST,
                params={"_method=GET","format=json"},
                produces="application/json")
@ResponseBody
public EntityCollectionResponse<org.molgenis.controller.PatientController.PatientResponse> retrievePatientCollectionJsonPost(@RequestBody
                                                                                                                                                EntityCollectionRequest patientCollectionRequest,
                                                                                                                                                @RequestParam(value="expand",required=false)
                                                                                                                                                String... expandFields)
                                                                                                                      throws DatabaseException

Throws:

DatabaseException

handleEntityNotFoundException

@ExceptionHandler(value=org.molgenis.framework.db.EntityNotFoundException.class)
@ResponseStatus(value=NOT_FOUND)
@ResponseBody
public ErrorMessageResponse handleEntityNotFoundException(EntityNotFoundException e)

handleDatabaseException

@ExceptionHandler(value=org.molgenis.framework.db.DatabaseException.class)
@ResponseStatus(value=INTERNAL_SERVER_ERROR)
@ResponseBody
public ErrorMessageResponse handleDatabaseException(DatabaseException e)

handleDatabaseAccessException

@ExceptionHandler(value=org.molgenis.framework.db.DatabaseAccessException.class)
@ResponseStatus(value=UNAUTHORIZED)
@ResponseBody
public ErrorMessageResponse handleDatabaseAccessException(DatabaseAccessException e)

handleRuntimeException

@ExceptionHandler(value=java.lang.RuntimeException.class)
@ResponseStatus(value=INTERNAL_SERVER_ERROR)
@ResponseBody
public ErrorMessageResponse handleRuntimeException(RuntimeException e)