org.molgenis.gaf

Class GafListValidationReport

java.lang.Object

org.molgenis.gaf.GafListValidationReport

@Component
@Scope(value="session")
public class GafListValidationReport
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
GafListValidationReport()

Method Summary

Methods

Modifier and Type	Method and Description
void	addEntry(java.lang.String runId, GafListValidationError validationError)
void	addGlobalErrorMessage(java.lang.String globalErrorMessage)
void	cleanUp()
java.util.List<java.lang.String>	getAllRunIds()
java.lang.String	getDataSetIdentifier()
java.lang.String	getDataSetName()
java.util.Map<java.lang.String,java.util.List<GafListValidationError>>	getEntries()
java.util.List<java.lang.String>	getInvalidRunIds()
java.io.File	getTempFile()
java.lang.String	getTempFileName()
java.lang.String	getTempFileOriginalName()
java.util.List<java.lang.String>	getValidationGlobalErrorMessages()
java.util.List<java.lang.String>	getValidRunIds()
boolean	hasErrors(java.lang.String runId)
boolean	hasGlobalErrors()
boolean	hasRunIdsErrors()
void	populateStatusImportedRuns()
void	setDataSetIdentifier(java.lang.String dataSetIdentifier)
void	setDataSetName(java.lang.String dataSetName)
protected void	setTempFile(java.io.File tempFile)
protected void	setTempFileName(java.lang.String tempFileName)
protected void	setTempFileOriginalName(java.lang.String tempFileOriginalName)
java.lang.String	toString()
java.lang.String	toStringHtml()
void	uploadCsvFile(org.springframework.web.multipart.MultipartFile csvFile)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

GafListValidationReport

public GafListValidationReport()

Method Detail

addEntry

public void addEntry(java.lang.String runId,
            GafListValidationError validationError)

addGlobalErrorMessage

public void addGlobalErrorMessage(java.lang.String globalErrorMessage)

getEntries

public java.util.Map<java.lang.String,java.util.List<GafListValidationError>> getEntries()

hasRunIdsErrors

public boolean hasRunIdsErrors()

hasGlobalErrors

public boolean hasGlobalErrors()

hasErrors

public boolean hasErrors(java.lang.String runId)

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

toStringHtml

public java.lang.String toStringHtml()

getAllRunIds

public java.util.List<java.lang.String> getAllRunIds()

Returns:

the validatedRunIds

getValidRunIds

public java.util.List<java.lang.String> getValidRunIds()

Returns:

the validRunIds

getInvalidRunIds

public java.util.List<java.lang.String> getInvalidRunIds()

Returns:

the invalidRunIds

populateStatusImportedRuns

public void populateStatusImportedRuns()

getDataSetName

public java.lang.String getDataSetName()

Returns:

the dataSetName

setDataSetName

public void setDataSetName(java.lang.String dataSetName)

Parameters:

dataSetName - the dataSetName to set

getTempFileName

public java.lang.String getTempFileName()

setTempFileName

protected void setTempFileName(java.lang.String tempFileName)

getTempFileOriginalName

public java.lang.String getTempFileOriginalName()

setTempFileOriginalName

protected void setTempFileOriginalName(java.lang.String tempFileOriginalName)

cleanUp

@PreDestroy
public void cleanUp()
             throws java.lang.Exception

Throws:

java.lang.Exception

getTempFile

public java.io.File getTempFile()

setTempFile

protected void setTempFile(java.io.File tempFile)

uploadCsvFile

public void uploadCsvFile(org.springframework.web.multipart.MultipartFile csvFile)
                   throws java.lang.Exception

Throws:

java.lang.Exception

getDataSetIdentifier

public java.lang.String getDataSetIdentifier()

setDataSetIdentifier

public void setDataSetIdentifier(java.lang.String dataSetIdentifier)

getValidationGlobalErrorMessages

public java.util.List<java.lang.String> getValidationGlobalErrorMessages()

Returns:

the validationGlobalErrorMessages