Uses of Class
org.molgenis.MolgenisOptions

Packages that use MolgenisOptions

Package	Description
org.molgenis	MOLGENIS generative platform for life sciences having framework, generators, models and util.
org.molgenis.generators	MOLGENIS generators.
org.molgenis.generators.db	Generates Database backends
org.molgenis.generators.doc	Generates UML documentation in html and images
org.molgenis.model	MOLGENIS meta model parser.

Uses of MolgenisOptions in org.molgenis

Methods in org.molgenis that return MolgenisOptions

Modifier and Type	Method and Description
MolgenisOptions	Molgenis.getMolgenisOptions()

Constructors in org.molgenis with parameters of type MolgenisOptions

Constructor and Description
Molgenis(MolgenisOptions options, Class<? extends Generator>... generatorsToUse)
Molgenis(MolgenisOptions options, String outputPath, Class<? extends Generator>... generatorsToUse) Construct a MOLGENIS generator

Uses of MolgenisOptions in org.molgenis.generators

Methods in org.molgenis.generators with parameters of type MolgenisOptions

Modifier and Type	Method and Description
Map<String,Object>	Generator.createTemplateArguments(MolgenisOptions options) Create default template arguments such as date, version etc.
abstract void	Generator.generate(Model model, MolgenisOptions options)
void	JpaRepositorySourceGen.generate(Model model, MolgenisOptions options)
void	DataTypeGen.generate(Model model, MolgenisOptions options)
void	ForEachEntityGenerator.generate(Model model, MolgenisOptions options)
void	ForEachMatrixGenerator.generate(Model model, MolgenisOptions options)
protected void	ForEachEntityGenerator.generate(Model model, MolgenisOptions options, boolean generateTests)
void	Generator.generate(Model model, MolgenisOptions options, String generatedPath)
String	Generator.getDocumentationPath(MolgenisOptions options) Generate the path for the generated documentation code.
String	Generator.getHandWrittenPath(MolgenisOptions options)
String	Generator.getProjectPath(MolgenisOptions options) Path for the whole project
String	Generator.getSourcePath(MolgenisOptions options) Generate the path for the generated source code.
String	Generator.getWebserverPath(MolgenisOptions options) Path for the web sites

Constructors in org.molgenis.generators with parameters of type MolgenisOptions

Constructor and Description
GeneratorHelper(MolgenisOptions options)

Uses of MolgenisOptions in org.molgenis.generators.db

Methods in org.molgenis.generators.db with parameters of type MolgenisOptions

Modifier and Type	Method and Description
void	EntitiesImporterGen.generate(Model model, MolgenisOptions options)
void	DatabaseConfigGen.generate(Model model, MolgenisOptions options)
void	JDBCMetaDatabaseGen.generate(Model model, MolgenisOptions options)
void	EntitiesValidatorGen.generate(Model model, MolgenisOptions options)
void	CrudRepositorySecurityDecoratorGen.generate(Model model, MolgenisOptions options)
void	PersistenceGen.generate(Model model, MolgenisOptions options)
void	JpaDatabaseGen.generate(Model model, MolgenisOptions options)

Uses of MolgenisOptions in org.molgenis.generators.doc

Methods in org.molgenis.generators.doc with parameters of type MolgenisOptions

Modifier and Type	Method and Description
void	DotDocGen.generate(Model model, MolgenisOptions options)
void	TextUmlGen.generate(Model model, MolgenisOptions options)
void	DotDocModuleDependencyGen.generate(Model model, MolgenisOptions options)
void	EntityModelDocGen.generate(Model model, MolgenisOptions options)
void	DotDocMinimalGen.generate(Model model, MolgenisOptions options)
void	FileFormatDocGen.generate(Model model, MolgenisOptions options)
void	ObjectModelDocGen.generate(Model model, MolgenisOptions options)
void	TableDocGen.generate(Model model, MolgenisOptions options)
void	DotDocGen.generate(Model model, MolgenisOptions options, boolean wait)
void	DotDocModuleDependencyGen.generate(Model model, MolgenisOptions options, boolean wait)

Uses of MolgenisOptions in org.molgenis.model

Methods in org.molgenis.model with parameters of type MolgenisOptions

Modifier and Type	Method and Description
static void	MolgenisModelValidator.createLinkTablesForMrefs(Model model, MolgenisOptions options) Add link tables for many to many relationships A link table entity will have the name of [from_entity]_[to_entity] A link table has two xrefs to the from/to entity respectively The column names are those of the respective fields In case of a self reference, the second column name is '_self'
static Model	MolgenisModel.parse(MolgenisOptions options)
static void	MolgenisModelValidator.validate(Model model, MolgenisOptions options)
static void	MolgenisModelValidator.validateNamesAndReservedWords(Model model, MolgenisOptions options)
static void	MolgenisModelValidator.validateNameSize(Model model, MolgenisOptions options)