org.molgenis.data.vcf

Class VcfRepositoryCollection

java.lang.Object

org.molgenis.data.support.FileRepositoryCollection

org.molgenis.data.vcf.VcfRepositoryCollection

All Implemented Interfaces:

Iterable<Repository>, RepositoryCollection

public class VcfRepositoryCollection
extends FileRepositoryCollection

Field Summary

Fields

Modifier and Type	Field and Description
static String	NAME

Fields inherited from class org.molgenis.data.support.FileRepositoryCollection

cellProcessors

Constructor Summary

Constructors

Constructor and Description
VcfRepositoryCollection(File file)

Method Summary

Modifier and Type	Method and Description
Repository	addEntityMeta(EntityMetaData entityMeta)
Iterable<String>	getEntityNames()
String	getName()
Repository	getRepository(String name)
boolean	hasRepository(String name)
Iterator<Repository>	iterator()

Methods inherited from class org.molgenis.data.support.FileRepositoryCollection

addCellProcessor, getFileNameExtensions

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Field Detail

NAME

public static final String NAME

See Also:

Constant Field Values

Constructor Detail

VcfRepositoryCollection

public VcfRepositoryCollection(File file)
                        throws IOException

Throws:

IOException

Method Detail

getEntityNames

public Iterable<String> getEntityNames()

Specified by:

getEntityNames in interface RepositoryCollection

Specified by:

getEntityNames in class FileRepositoryCollection

getRepository

public Repository getRepository(String name)

Specified by:

getRepository in interface RepositoryCollection

Specified by:

getRepository in class FileRepositoryCollection

getName

public String getName()

addEntityMeta

public Repository addEntityMeta(EntityMetaData entityMeta)

iterator

public Iterator<Repository> iterator()

hasRepository

public boolean hasRepository(String name)