org.molgenis.data.vcf.model

Class VcfAttributes

java.lang.Object

org.molgenis.data.vcf.model.VcfAttributes

@Component
public class VcfAttributes
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
static String	ALT
static String	CHROM
static String	FILTER
static String	FORMAT_GT
static String	ID
static String	INFO
static String	INTERNAL_ID
static String	POS
static String	QUAL
static String	REF
static String	SAMPLES

Constructor Summary

Constructors

Constructor and Description
VcfAttributes(AttributeFactory attributeFactory)

Method Summary

Modifier and Type	Method and Description
Attribute	getAltAttribute()
Attribute	getChromAttribute()
Attribute	getFilterAttribute()
Attribute	getIdAttribute()
Attribute	getPosAttribute()
Attribute	getQualAttribute()
Attribute	getRefAttribute()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

CHROM

public static final String CHROM

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Constant Field Values

ALT

public static final String ALT

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Constant Field Values

POS

public static final String POS

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Constant Field Values

REF

public static final String REF

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Constant Field Values

FILTER

public static final String FILTER

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Constant Field Values

QUAL

public static final String QUAL

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Constant Field Values

ID

public static final String ID

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Constant Field Values

INTERNAL_ID

public static final String INTERNAL_ID

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Constant Field Values

INFO

public static final String INFO

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Constant Field Values

FORMAT_GT

public static final String FORMAT_GT

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Constant Field Values

SAMPLES

public static final String SAMPLES

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Constant Field Values

Constructor Detail

VcfAttributes

@Autowired
public VcfAttributes(AttributeFactory attributeFactory)

Method Detail

getChromAttribute

public Attribute getChromAttribute()

getAltAttribute

public Attribute getAltAttribute()

getPosAttribute

public Attribute getPosAttribute()

getRefAttribute

public Attribute getRefAttribute()

getFilterAttribute

public Attribute getFilterAttribute()

getQualAttribute

public Attribute getQualAttribute()

getIdAttribute

public Attribute getIdAttribute()