Package org.molgenis.data.vcf

Class VcfRepositoryCollection

  • All Implemented Interfaces:
    java.lang.Iterable<org.molgenis.data.Repository<org.molgenis.data.Entity>>, org.molgenis.data.RepositoryCollection
    public class VcfRepositoryCollection
extends org.molgenis.data.file.support.FileRepositoryCollection

    • Field Summary

      Fields 
      Modifier and Type Field Description
      static java.lang.String NAME  

      • Fields inherited from class org.molgenis.data.file.support.FileRepositoryCollection

        cellProcessors

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      java.lang.Iterable<java.lang.String> getEntityTypeIds()  
      java.lang.String getName()  
      org.molgenis.data.Repository<org.molgenis.data.Entity> getRepository​(java.lang.String name)  
      boolean hasRepository​(java.lang.String name)  
      boolean hasRepository​(org.molgenis.data.meta.model.EntityType entityType)  
      void init()  
      java.util.Iterator<org.molgenis.data.Repository<org.molgenis.data.Entity>> iterator()  

      • Methods inherited from class org.molgenis.data.file.support.FileRepositoryCollection

        addCellProcessor, getFileNameExtensions

      • Methods inherited from class org.molgenis.data.support.AbstractRepositoryCollection

        addAttribute, createRepository, deleteAttribute, deleteRepository, getCapabilities, getRepository, updateAttribute, updateRepository

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

      • Methods inherited from interface java.lang.Iterable

        forEach, spliterator

      • Methods inherited from interface org.molgenis.data.RepositoryCollection

        stream

    • Constructor Detail

      • VcfRepositoryCollection

        public VcfRepositoryCollection​(java.io.File file)

    • Method Detail

      • init

        public void init()
        Specified by:
        init in class org.molgenis.data.file.support.FileRepositoryCollection

      • getEntityTypeIds

        public java.lang.Iterable<java.lang.String> getEntityTypeIds()

      • getRepository

        public org.molgenis.data.Repository<org.molgenis.data.Entity> getRepository​(java.lang.String name)

      • getName

        public java.lang.String getName()

      • iterator

        public java.util.Iterator<org.molgenis.data.Repository<org.molgenis.data.Entity>> iterator()

      • hasRepository

        public boolean hasRepository​(java.lang.String name)

      • hasRepository

        public boolean hasRepository​(org.molgenis.data.meta.model.EntityType entityType)