VcfRepository (data-vcf 8.3.5 API)

java.lang.Object
- org.molgenis.data.support.AbstractRepository
- - org.molgenis.data.vcf.VcfRepository

All Implemented Interfaces:

Closeable, AutoCloseable, Iterable<Entity>, Repository<Entity>
```
public class VcfRepository
extends AbstractRepository
```
Repository implementation for vcf files.
The filename without the extension is considered to be the entityname

Field Summary

Fields
Modifier and Type Field Description

static int BATCH_SIZE

static String DEFAULT_ATTRIBUTE_DESCRIPTION

static String NAME

static String ORIGINAL_NAME

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`long`	`count()`
`void`	`forEachBatched(Consumer<List<Entity>> consumer, int batchSize)`
`Set<RepositoryCapability>`	`getCapabilities()`
`EntityType`	`getEntityType()`
`Iterator<Entity>`	`iterator()`

Methods inherited from class org.molgenis.data.support.AbstractRepository
add, add, aggregate, close, count, delete, delete, deleteAll, deleteAll, deleteById, findAll, findAll, findAll, findOne, findOneById, findOneById, forEachBatched, getName, getQueryOperators, query, update, update

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Iterable
forEach, spliterator

Methods inherited from interface org.molgenis.data.Repository
getExistingIDs, upsertBatch

Field Detail
- DEFAULT_ATTRIBUTE_DESCRIPTION
```
public static final String DEFAULT_ATTRIBUTE_DESCRIPTION
```
  See Also:
  
  Constant Field Values
- NAME
```
public static final String NAME
```
  See Also:
  
  Constant Field Values
- ORIGINAL_NAME
```
public static final String ORIGINAL_NAME
```
  See Also:
  
  Constant Field Values
- BATCH_SIZE
```
public static final int BATCH_SIZE
```
  See Also:
  
  Constant Field Values

Method Detail

iterator
```
public Iterator<Entity> iterator()
```

getEntityType
```
public EntityType getEntityType()
```

getCapabilities

public Set<RepositoryCapability> getCapabilities()

count
```
public long count()
```
Specified by:

count in interface Repository<Entity>

Overrides:

count in class AbstractRepository

forEachBatched

public void forEachBatched(Consumer<List<Entity>> consumer,
                           int batchSize)