org.molgenis.dataexplorer.controller

Class AnnotatorController

java.lang.Object

org.molgenis.dataexplorer.controller.AnnotatorController

@Controller
 @RequestMapping(value="/annotators")
public class AnnotatorController
extends Object

Controller wrapper for the dataexplorer annotator

Author:

mdehaan

Field Summary

Fields

Modifier and Type	Field and Description
static String	URI

Constructor Summary

Constructors

Constructor and Description
AnnotatorController()

Method Summary

Modifier and Type	Method and Description
String	annotateData(String[] annotatorNames, String entityName, boolean createCopy) Annotates a dataset based on selected dataset and selected annotators.
Map<String,Map<String,Object>>	getMapOfAvailableAnnotators(String dataSetName) Gets a map of all available annotators.
ErrorMessageResponse	handleRuntimeException(RuntimeException e)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

URI

public static final String URI

See Also:

Constant Field Values

Constructor Detail

AnnotatorController

public AnnotatorController()

Method Detail

getMapOfAvailableAnnotators

@RequestMapping(value="/get-available-annotators",
                method=POST)
 @ResponseBody
public Map<String,Map<String,Object>> getMapOfAvailableAnnotators(@RequestBody
                                                                                                                                                                 String dataSetName)

Gets a map of all available annotators.

Parameters:

dataSetName -

Returns:

annotatorMap

annotateData

@RequestMapping(value="/annotate-data",
                method=POST)
 @ResponseBody
 @Transactional
public String annotateData(@RequestParam(value="annotatorNames",required=false)
                                                                                                                               String[] annotatorNames,
                                                                                                                               @RequestParam(value="dataset-identifier")
                                                                                                                               String entityName,
                                                                                                                               @RequestParam(value="createCopy",required=false)
                                                                                                                               boolean createCopy)

Annotates a dataset based on selected dataset and selected annotators. Creates a copy of the original dataset if option is ticked by the user.

Parameters:

annotatorNames -

entityName -

createCopy -

Returns:

repositoryName

handleRuntimeException

@ExceptionHandler(value=java.lang.RuntimeException.class)
 @ResponseBody
 @ResponseStatus(value=INTERNAL_SERVER_ERROR)
public ErrorMessageResponse handleRuntimeException(RuntimeException e)