Package org.molgenis.genomebrowser

Class GenomeBrowserTrack

java.lang.Object

org.molgenis.genomebrowser.GenomeBrowserTrack

public abstract class GenomeBrowserTrack
extends java.lang.Object

Constructor Summary

Constructors

Constructor	Description
GenomeBrowserTrack()

Method Summary

Modifier and Type	Method	Description
static GenomeBrowserTrack	create(java.lang.String id, java.lang.String label, java.lang.String labelAttr, org.molgenis.data.meta.model.EntityType entity, GenomeBrowserSettings.TrackType trackType, java.lang.Iterable<GenomeBrowserTrack> molgenisReferenceTracks, GenomeBrowserSettings.MolgenisReferenceMode molgenisReferenceMode, GenomeBrowserAttributes genomeBrowserAttrs, java.lang.String actions, java.lang.String attrs, java.lang.String scoreAttr, java.lang.String exonKey, java.lang.String featureInfoPlugin)
static GenomeBrowserTrack	create(GenomeBrowserSettings settings)
abstract java.lang.String	getActions()
abstract java.lang.String	getAttrs()
abstract org.molgenis.data.meta.model.EntityType	getEntity()
abstract java.lang.String	getExonKey()
abstract java.lang.String	getFeatureInfoPlugin()
abstract GenomeBrowserAttributes	getGenomeBrowserAttrs()
abstract java.lang.String	getId()
abstract java.lang.String	getLabel()
abstract java.lang.String	getLabelAttr()
abstract GenomeBrowserSettings.MolgenisReferenceMode	getMolgenisReferenceMode()
abstract java.lang.Iterable<GenomeBrowserTrack>	getMolgenisReferenceTracks()
abstract java.lang.String	getScoreAttr()
abstract GenomeBrowserSettings.TrackType	getTrackType()
java.lang.String	toTrackString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GenomeBrowserTrack

public GenomeBrowserTrack()

Method Detail

create

public static GenomeBrowserTrack create(java.lang.String id,
                                        java.lang.String label,
                                        java.lang.String labelAttr,
                                        org.molgenis.data.meta.model.EntityType entity,
                                        GenomeBrowserSettings.TrackType trackType,
                                        java.lang.Iterable<GenomeBrowserTrack> molgenisReferenceTracks,
                                        GenomeBrowserSettings.MolgenisReferenceMode molgenisReferenceMode,
                                        GenomeBrowserAttributes genomeBrowserAttrs,
                                        java.lang.String actions,
                                        java.lang.String attrs,
                                        java.lang.String scoreAttr,
                                        java.lang.String exonKey,
                                        java.lang.String featureInfoPlugin)

create

public static GenomeBrowserTrack create(GenomeBrowserSettings settings)

getId

public abstract java.lang.String getId()

getLabel

public abstract java.lang.String getLabel()

getLabelAttr

public abstract java.lang.String getLabelAttr()

getEntity

public abstract org.molgenis.data.meta.model.EntityType getEntity()

getTrackType

public abstract GenomeBrowserSettings.TrackType getTrackType()

getMolgenisReferenceTracks

public abstract java.lang.Iterable<GenomeBrowserTrack> getMolgenisReferenceTracks()

getMolgenisReferenceMode

public abstract GenomeBrowserSettings.MolgenisReferenceMode getMolgenisReferenceMode()

getGenomeBrowserAttrs

public abstract GenomeBrowserAttributes getGenomeBrowserAttrs()

getActions

@Nullable
@CheckForNull
public abstract java.lang.String getActions()

getAttrs

@Nullable
@CheckForNull
public abstract java.lang.String getAttrs()

getScoreAttr

@Nullable
@CheckForNull
public abstract java.lang.String getScoreAttr()

getExonKey

@Nullable
@CheckForNull
public abstract java.lang.String getExonKey()

getFeatureInfoPlugin

@Nullable
@CheckForNull
public abstract java.lang.String getFeatureInfoPlugin()

toTrackString

public java.lang.String toTrackString()