Package org.molgenis.genomebrowser.meta

Class GenomeBrowserSettings

java.lang.Object

org.molgenis.data.support.StaticEntity

org.molgenis.genomebrowser.meta.GenomeBrowserSettings

All Implemented Interfaces:

org.molgenis.data.Entity, org.molgenis.util.i18n.Identifiable

public class GenomeBrowserSettings
extends org.molgenis.data.support.StaticEntity

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	GenomeBrowserSettings.MolgenisReferenceMode
static class	GenomeBrowserSettings.TrackType

Constructor Summary

Constructors

Constructor	Description
GenomeBrowserSettings(java.lang.String identifier, org.molgenis.data.meta.model.EntityType entityType)
GenomeBrowserSettings(org.molgenis.data.Entity entity)
GenomeBrowserSettings(org.molgenis.data.meta.model.EntityType entityType)

Method Summary

Modifier and Type	Method	Description
java.lang.String	getActions()
java.lang.String	getAttrs()
org.molgenis.data.meta.model.EntityType	getEntity()
java.lang.String	getExonKey()
java.lang.String	getFeatureInfoPlugin()
GenomeBrowserAttributes	getGenomeBrowserAttrs()
java.lang.String	getIdentifier()
java.lang.String	getLabel()
org.molgenis.data.meta.model.Attribute	getLabelAttr()
GenomeBrowserSettings.MolgenisReferenceMode	getMolgenisReferenceMode()
java.util.stream.Stream<GenomeBrowserTrack>	getMolgenisReferenceTracks()
java.lang.String	getScoreAttr()
GenomeBrowserSettings.TrackType	getTrackType()
void	setActions(java.lang.String actions)
void	setAttrs(java.lang.String attrs)
void	setEntity(org.molgenis.data.meta.model.EntityType entity)
void	setExonKey(java.lang.String exonKey)
void	setFeatureInfoPlugin(java.lang.String featureInfoPlugin)
void	setGenomeBrowserAttrs(GenomeBrowserAttributes genomeBrowserAttrs)
void	setIdentifier(java.lang.String identifier)
void	setLabel(java.lang.String label)
void	setLabelAttr(org.molgenis.data.meta.model.Attribute labelAttr)
void	setMolgenisReferenceMode(GenomeBrowserSettings.MolgenisReferenceMode mode)
void	setMolgenisReferenceTracks(GenomeBrowserSettings molgenisReferenceTracks)
void	setScoreAttr(java.lang.String scoreAttr)
void	setTrackType(GenomeBrowserSettings.TrackType trackType)

Methods inherited from class org.molgenis.data.support.StaticEntity

get, getAttributeNames, getBoolean, getDouble, getEntities, getEntities, getEntity, getEntity, getEntityType, getIdValue, getInstant, getInt, getLabelValue, getLocalDate, getLong, getString, init, set, set, setIdValue, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.molgenis.data.Entity

get, getBoolean, getDouble, getEntities, getEntities, getEntity, getEntity, getInstant, getInt, getLocalDate, getLong, getString, set

Constructor Detail

GenomeBrowserSettings

public GenomeBrowserSettings(org.molgenis.data.Entity entity)

GenomeBrowserSettings

public GenomeBrowserSettings(org.molgenis.data.meta.model.EntityType entityType)

GenomeBrowserSettings

public GenomeBrowserSettings(java.lang.String identifier,
                             org.molgenis.data.meta.model.EntityType entityType)

Method Detail

getIdentifier

public java.lang.String getIdentifier()

setIdentifier

public void setIdentifier(java.lang.String identifier)

getLabel

public java.lang.String getLabel()

setLabel

public void setLabel(java.lang.String label)

getLabelAttr

public org.molgenis.data.meta.model.Attribute getLabelAttr()

setLabelAttr

public void setLabelAttr(org.molgenis.data.meta.model.Attribute labelAttr)

getEntity

public org.molgenis.data.meta.model.EntityType getEntity()

setEntity

public void setEntity(org.molgenis.data.meta.model.EntityType entity)

getTrackType

public GenomeBrowserSettings.TrackType getTrackType()

setTrackType

public void setTrackType(GenomeBrowserSettings.TrackType trackType)

getMolgenisReferenceTracks

public java.util.stream.Stream<GenomeBrowserTrack> getMolgenisReferenceTracks()

setMolgenisReferenceTracks

public void setMolgenisReferenceTracks(GenomeBrowserSettings molgenisReferenceTracks)

getMolgenisReferenceMode

public GenomeBrowserSettings.MolgenisReferenceMode getMolgenisReferenceMode()

setMolgenisReferenceMode

public void setMolgenisReferenceMode(GenomeBrowserSettings.MolgenisReferenceMode mode)

getGenomeBrowserAttrs

public GenomeBrowserAttributes getGenomeBrowserAttrs()

setGenomeBrowserAttrs

public void setGenomeBrowserAttrs(GenomeBrowserAttributes genomeBrowserAttrs)

getActions

@Nullable
@CheckForNull
public java.lang.String getActions()

setActions

public void setActions(java.lang.String actions)

getAttrs

@Nullable
@CheckForNull
public java.lang.String getAttrs()

setAttrs

public void setAttrs(java.lang.String attrs)

getScoreAttr

@Nullable
@CheckForNull
public java.lang.String getScoreAttr()

setScoreAttr

public void setScoreAttr(java.lang.String scoreAttr)

getExonKey

@Nullable
@CheckForNull
public java.lang.String getExonKey()

setExonKey

public void setExonKey(java.lang.String exonKey)

getFeatureInfoPlugin

@Nullable
@CheckForNull
public java.lang.String getFeatureInfoPlugin()

setFeatureInfoPlugin

public void setFeatureInfoPlugin(java.lang.String featureInfoPlugin)