org.molgenis.annotators.ui

Class AnnotatorsUIController

java.lang.Object

org.molgenis.framework.ui.MolgenisPluginController

org.molgenis.annotators.ui.AnnotatorsUIController

@Controller
@RequestMapping(value="/plugin/annotateUI")
public class AnnotatorsUIController
extends MolgenisPluginController

Controller wrapper for the Annotation UI.

Author:

mdehaan

Field Summary

Fields

Modifier and Type	Field and Description
static String	URI

Fields inherited from class org.molgenis.framework.ui.MolgenisPluginController

PLUGIN_URI_PREFIX

Constructor Summary

Constructors

Constructor and Description
AnnotatorsUIController(AnnotatorsUIService pluginAnnotatorsUIService)

Method Summary

Methods

Modifier and Type	Method and Description
Map<String,Boolean>	changeSelectedDataSet(String selectedDataSetIdentifier, org.springframework.ui.Model model)
String	filterMyVariants(String[] annotatorNames, org.springframework.ui.Model model, String dataSetIdentifier)
void	handleAnnotatorFileUpload(javax.servlet.http.Part part, String submittedDataSetName)
Map<String,String>	handleRuntimeException(RuntimeException e)
String	init(String selectedDataSetIdentifier, org.springframework.ui.Model model)

Methods inherited from class org.molgenis.framework.ui.MolgenisPluginController

getId, getUri

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

URI

public static final String URI

See Also:

Constant Field Values

Constructor Detail

AnnotatorsUIController

@Autowired
public AnnotatorsUIController(AnnotatorsUIService pluginAnnotatorsUIService)

Method Detail

init

@RequestMapping(method=GET)
public String init(String selectedDataSetIdentifier,
                         org.springframework.ui.Model model)

changeSelectedDataSet

@RequestMapping(value="/change-selected-dataset")
@ResponseBody
public Map<String,Boolean> changeSelectedDataSet(@RequestBody
                                                                    String selectedDataSetIdentifier,
                                                                    org.springframework.ui.Model model)

handleAnnotatorFileUpload

@RequestMapping(value="/file-upload",
                headers="content-type=multipart/*",
                method=POST)
@ResponseStatus(value=NO_CONTENT)
public void handleAnnotatorFileUpload(@RequestParam(value="file-input-field")
                                                           javax.servlet.http.Part part,
                                                           @RequestParam(value="dataset-name")
                                                           String submittedDataSetName)
                               throws IOException

Throws:

IOException

filterMyVariants

@RequestMapping(value="/execute-annotation-app",
                method=POST)
public String filterMyVariants(@RequestParam(value="annotatorNames",required=false)
                                     String[] annotatorNames,
                                     org.springframework.ui.Model model,
                                     @RequestParam(value="dataset-identifier")
                                     String dataSetIdentifier)

handleRuntimeException

@ExceptionHandler(value=java.lang.RuntimeException.class)
@ResponseBody
@ResponseStatus(value=INTERNAL_SERVER_ERROR)
public Map<String,String> handleRuntimeException(RuntimeException e)