Constant Field Values

Contents

• org.molgenis.*

org.molgenis.*

org.molgenis.omx.biobankconnect.algorithm.AlgorithmEditorController

Modifier and Type	Constant Field	Value
public static final String	ID	"algorithm"
public static final String	URI	"/plugin/algorithm"

org.molgenis.omx.biobankconnect.mappingmanager.MappingManagerController

Modifier and Type	Constant Field	Value
public static final String	ID	"mappingmanager"
public static final String	URI	"/plugin/mappingmanager"

org.molgenis.omx.biobankconnect.ontology.repository.AbstractOntologyRepository

Modifier and Type	Constant Field	Value
public static final String	ALTERNATIVE_DEFINITION	"alternativeDefinition"
public static final String	CHIDLREN	"children"
public static final String	ENTITY_TYPE	"entity_type"
public static final String	FIELDTYPE	"fieldType"
public static final String	ID	"id"
public static final String	ILLEGAL_CHARACTERS_PATTERN	"[^(a-zA-Z0-9 )]"
public static final String	ILLEGAL_CHARACTERS_REPLACEMENT	"\\s"
public static final String	LAST	"isLast"
public static final String	MULTI_WHITESPACES	" +"
public static final String	NODE_PATH	"nodePath"
public static final String	NODE_PATH_REPLACEMENT_PATTERN	"\\.[0-9]+$"
public static final String	ONTOLOGY_IRI	"ontologyIRI"
public static final String	ONTOLOGY_NAME	"ontologyName"
public static final String	ONTOLOGY_TERM	"ontologyTerm"
public static final String	ONTOLOGY_TERM_DEFINITION	"definition"
public static final String	ONTOLOGY_TERM_IRI	"ontologyTermIRI"
public static final String	PARENT_NODE_PATH	"parentNodePath"
public static final String	PARENT_ONTOLOGY_TERM_IRI	"parentOntologyTermIRI"
public static final String	ROOT	"root"
public static final String	SINGLE_WHITESPACE	" "
public static final String	SYNONYMS	"ontologyTermSynonym"
public static final String	TYPE_ONTOLOGYTERM	"ontologyTerm"

org.molgenis.omx.biobankconnect.ontology.repository.OntologyIndexRepository

Modifier and Type	Constant Field	Value
public static final String	TYPE_ONTOLOGY	"indexedOntology"

org.molgenis.omx.biobankconnect.ontology.repository.OntologyQueryRepository

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_ONTOLOGY_REPO	"ontologyindex"

org.molgenis.omx.biobankconnect.ontology.repository.OntologyTermQueryRepository

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_ONTOLOGY_TERM_REPO	"ontologytermindex"

org.molgenis.omx.biobankconnect.ontologyindexer.OntologyIndexerController

Modifier and Type	Constant Field	Value
public static final String	ID	"ontologyindexer"
public static final String	URI	"/plugin/ontologyindexer"

org.molgenis.omx.biobankconnect.ontologymatcher.AsyncOntologyMatcher

Modifier and Type	Constant Field	Value
public static final String	PROTOCOL_IDENTIFIER	"store_mapping"
public static final String	STORE_MAPPING_ALGORITHM_SCRIPT	"store_mapping_algorithm_script"
public static final String	STORE_MAPPING_CONFIRM_MAPPING	"store_mapping_confirm_mapping"
public static final String	STORE_MAPPING_FEATURE	"store_mapping_feature"
public static final String	STORE_MAPPING_MAPPED_FEATURE	"store_mapping_mapped_feature"
public static final String	STORE_MAPPING_SCORE	"store_mapping_score"

org.molgenis.omx.biobankconnect.ontologyservice.OntologyServiceController

Modifier and Type	Constant Field	Value
public static final String	ID	"ontologyservice"
public static final String	URI	"/plugin/ontologyservice"

org.molgenis.omx.biobankconnect.ontologytree.OntologyTreeController

Modifier and Type	Constant Field	Value
public static final String	ID	"ontologytree"
public static final String	URI	"/plugin/ontologytree"

org.molgenis.omx.biobankconnect.wizard.BiobankConnectController

Modifier and Type	Constant Field	Value
public static final String	ID	"biobankconnect"
public static final String	URI	"/plugin/biobankconnect"