org.molgenis.omx.biobankconnect.ontology.repository

Class AbstractOntologyQueryRepository

java.lang.Object

org.molgenis.omx.biobankconnect.ontology.repository.AbstractOntologyRepository

org.molgenis.omx.biobankconnect.ontology.repository.AbstractOntologyQueryRepository

All Implemented Interfaces:

Closeable, AutoCloseable, Iterable<Entity>, Countable, Queryable, Repository

Direct Known Subclasses:

OntologyQueryRepository, OntologyTermQueryRepository

public abstract class AbstractOntologyQueryRepository
extends AbstractOntologyRepository
implements Queryable

Field Summary

Fields inherited from class org.molgenis.omx.biobankconnect.ontology.repository.AbstractOntologyRepository

ALTERNATIVE_DEFINITION, CHIDLREN, ENTITY_TYPE, entityMetaData, entityName, FIELDTYPE, ID, ILLEGAL_CHARACTERS_PATTERN, ILLEGAL_CHARACTERS_REPLACEMENT, LAST, MULTI_WHITESPACES, NODE_PATH, NODE_PATH_REPLACEMENT_PATTERN, ONTOLOGY_IRI, ONTOLOGY_NAME, ONTOLOGY_TERM, ONTOLOGY_TERM_DEFINITION, ONTOLOGY_TERM_IRI, PARENT_NODE_PATH, PARENT_ONTOLOGY_TERM_IRI, ROOT, searchService, SINGLE_WHITESPACE, SYNONYMS, TYPE_ONTOLOGYTERM

Constructor Summary

Constructors

Constructor and Description
AbstractOntologyQueryRepository(String entityName, SearchService searchService)

Method Summary

Methods

Modifier and Type	Method and Description
long	count()
Iterable<Entity>	findAll(Iterable<Object> ids)
<E extends Entity> Iterable<E>	findAll(Iterable<Object> ids, Class<E> clazz)
<E extends Entity> Iterable<E>	findAll(Query q, Class<E> clazz)
<E extends Entity> E	findOne(Object id, Class<E> clazz)
<E extends Entity> E	findOne(Query q, Class<E> clazz)
Hit	findOneInternal(String documentType, Query q)
Iterator<Entity>	iterator()
<E extends Entity> Iterable<E>	iterator(Class<E> clazz)

Methods inherited from class org.molgenis.omx.biobankconnect.ontology.repository.AbstractOntologyRepository

close, getEntityMetaData, getName, getUrl

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.molgenis.data.Queryable

count, findAll, findOne, findOne, query

Constructor Detail

AbstractOntologyQueryRepository

@Autowired
public AbstractOntologyQueryRepository(String entityName,
                                         SearchService searchService)

Method Detail

findOneInternal

public Hit findOneInternal(String documentType,
                  Query q)

iterator

public Iterator<Entity> iterator()

Specified by:

iterator in interface Iterable<Entity>

findAll

public Iterable<Entity> findAll(Iterable<Object> ids)

Specified by:

findAll in interface Queryable

count

public long count()

Specified by:

count in interface Countable

findAll

public <E extends Entity> Iterable<E> findAll(Query q,
                                     Class<E> clazz)

Specified by:

findAll in interface Queryable

findAll

public <E extends Entity> Iterable<E> findAll(Iterable<Object> ids,
                                     Class<E> clazz)

Specified by:

findAll in interface Queryable

findOne

public <E extends Entity> E findOne(Object id,
                           Class<E> clazz)

Specified by:

findOne in interface Queryable

findOne

public <E extends Entity> E findOne(Query q,
                           Class<E> clazz)

Specified by:

findOne in interface Queryable

iterator

public <E extends Entity> Iterable<E> iterator(Class<E> clazz)

Specified by:

iterator in interface Repository

Specified by:

iterator in class AbstractOntologyRepository