Uses of Class
org.molgenis.omx.observ.Protocol

Packages that use Protocol

org.molgenis.omx.observ
org.molgenis.omx.observ.db
org.molgenis.omx.observ.ui
org.molgenis.omx.protocol
org.molgenis.omx.utils
org.molgenis.service

Uses of Protocol in org.molgenis.omx.observ

Methods in org.molgenis.omx.observ that return Protocol

Protocol	Protocol.create(Tuple tuple)
static Protocol	Protocol.findById(Database db, Integer id)
static Protocol	Protocol.findByIdentifier(Database db, String identifier)
Protocol	Protocol_Subprotocols.getProtocol() Get the .
Protocol	Protocol_Features.getProtocol() Get the .
Protocol	Protocol_Subprotocols.getProtocol(Database db) Deprecated.
Protocol	Protocol_Features.getProtocol(Database db) Deprecated.
Protocol	DataSet.getProtocolUsed() Get the Reference to the protocol that is being used (if available).
Protocol	DataSet.getProtocolUsed(Database db) Deprecated.
Protocol	Protocol_Subprotocols.getSubprotocols() Get the .
Protocol	Protocol_Subprotocols.getSubprotocols(Database db) Deprecated.

Methods in org.molgenis.omx.observ that return types with arguments of type Protocol

static List<? extends Protocol>	Protocol.find(Database db, QueryRule... rules) Shorthand for db.find(Protocol.class, org.molgenis.framework.db.QueryRule ...
Collection<Protocol>	ObservableFeature.getFeaturesProtocolCollection()
Collection<Protocol>	ObservableFeature.getFeaturesProtocolCollection(Database db)
List<Protocol>	Protocol.getSubprotocols() Get the Subprotocols of this protocol.
List<Protocol>	Protocol.getSubprotocols(Database db) Deprecated.
Collection<Protocol>	Protocol.getSubprotocolsProtocolCollection()
Collection<Protocol>	Protocol.getSubprotocolsProtocolCollection(Database db)
static Query<? extends Protocol>	Protocol.query(Database db) Shorthand for db.query(Protocol.class).

Methods in org.molgenis.omx.observ with parameters of type Protocol

void	Protocol_Subprotocols.setProtocol(Protocol protocol) Set the .
void	Protocol_Features.setProtocol(Protocol protocol) Set the .
void	DataSet.setProtocolUsed(Protocol protocolUsed) Set the Reference to the protocol that is being used (if available).
void	Protocol.setSubprotocols(Protocol... subprotocols)
void	Protocol_Subprotocols.setSubprotocols(Protocol subprotocols) Set the .

Method parameters in org.molgenis.omx.observ with type arguments of type Protocol

void	ObservableFeature.setFeaturesProtocolCollection(Collection<Protocol> collection)
void	Protocol.setSubprotocols(List<Protocol> subprotocols) Set the Subprotocols of this protocol.
void	Protocol.setSubprotocolsProtocolCollection(Collection<Protocol> collection)

Constructors in org.molgenis.omx.observ with parameters of type Protocol

Protocol(Protocol copyMe)
copy constructor

Uses of Protocol in org.molgenis.omx.observ.db

Methods in org.molgenis.omx.observ.db that return Protocol

Protocol

ProtocolJpaMapper.create()

Methods in org.molgenis.omx.observ.db that return types with arguments of type Protocol

List<Protocol>

ProtocolJpaMapper.createList(int size) Return EMPTY list of given allocated size

Methods in org.molgenis.omx.observ.db with parameters of type Protocol

void	ProtocolJpaMapper.create(Protocol entity) This method first saves the objects that are being refered to by entity, then the entity itself and finally the objects that refer to this object
void	ProtocolJpaMapper.destroy(Protocol protocol)
void	ProtocolJpaMapper.edit(Protocol protocol)

Method parameters in org.molgenis.omx.observ.db with type arguments of type Protocol

int	ProtocolJpaMapper.executeAdd(List<? extends Protocol> entities)
int	ProtocolJpaMapper.executeRemove(List<? extends Protocol> entities)
int	ProtocolJpaMapper.executeUpdate(List<? extends Protocol> entities)
void	ProtocolJpaMapper.prepareFileAttachements(List<Protocol> entities, File baseDir)
void	ProtocolJpaMapper.resolveForeignKeys(List<Protocol> entities)
boolean	ProtocolJpaMapper.saveFileAttachements(List<Protocol> entities, File baseDir)

Uses of Protocol in org.molgenis.omx.observ.ui

Methods in org.molgenis.omx.observ.ui that return types with arguments of type Protocol

Class<Protocol>

ProtocolForm.getEntityClass()

Constructors in org.molgenis.omx.observ.ui with parameters of type Protocol

ProtocolForm(Protocol entity)

Uses of Protocol in org.molgenis.omx.protocol

Constructors in org.molgenis.omx.protocol with parameters of type Protocol

ProtocolTable(Protocol protocol, Database db)

Uses of Protocol in org.molgenis.omx.utils

Methods in org.molgenis.omx.utils that return types with arguments of type Protocol

static List<Protocol>

ProtocolUtils.getProtocolDescendants(Protocol protocol) Returns the descendants of the given protocol including the given protocol

Methods in org.molgenis.omx.utils with parameters of type Protocol

static List<Protocol>

ProtocolUtils.getProtocolDescendants(Protocol protocol) Returns the descendants of the given protocol including the given protocol

Uses of Protocol in org.molgenis.service

Methods in org.molgenis.service that return Protocol

Protocol	ProtocolService.create(Protocol protocol)
Protocol	ProtocolService.read(Integer id)

Methods in org.molgenis.service that return types with arguments of type Protocol

Iterable<Protocol>	ProtocolService.readAll()
EntityPager<Protocol>	ProtocolService.readAll(int start, int num, List<QueryRule> queryRules)

Methods in org.molgenis.service with parameters of type Protocol

Protocol	ProtocolService.create(Protocol protocol)
void	ProtocolService.update(Protocol protocol)