org.molgenis.omx.datasetdeleter
Class DataSetDeleterController

java.lang.Object
  org.molgenis.framework.ui.MolgenisPlugin
      org.molgenis.omx.datasetdeleter.DataSetDeleterController

@Controller
@RequestMapping(value="/plugin/datasetdeleter")
public class DataSetDeleterController
extends MolgenisPlugin

Field Summary

static String

URI

Fields inherited from class org.molgenis.framework.ui.MolgenisPlugin

PLUGIN_URI_PREFIX

Constructor Summary

DataSetDeleterController()

Method Summary

protected int	countReferringProtocols(Characteristic characteristic, List<Protocol> allProtocols) Count the number of times a protocol of feature is referred to from a(n other) protocol
String	delete(String datasetIdentifier, boolean deletemetadata)
String	delete(String datasetIdentifier, org.springframework.web.context.request.WebRequest webRequest)
protected void	deleteCategories(List<Category> categories)
protected void	deleteData(DataSet dataset) Deletes the data from a given dataSet
protected void	deleteFeatures(List<ObservableFeature> features, List<Protocol> allProtocols) Deletes all features which do not have multiple Protocols referencing them
protected void	deleteObservedValues(ObservationSet observationSet) Deletes all ObservedValues from a given observationSet
protected List<Protocol>	deleteProtocol(Protocol protocol, List<Protocol> allProtocols) Deletes all subprotocols which do not have multiple Protocols referencing them
String	handleNotAuthenticated()
String	init(org.springframework.ui.Model model)

Methods inherited from class org.molgenis.framework.ui.MolgenisPlugin

getId, getUri

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

URI

public static final String URI

See Also:

Constant Field Values

Constructor Detail

DataSetDeleterController

public DataSetDeleterController()

Method Detail

init

@RequestMapping(method=GET)
public String init(org.springframework.ui.Model model)
            throws Exception

Throws:

Exception

delete

@RequestMapping(value="/delete",
                method=POST)
@ResponseBody
public String delete(@RequestParam(value="dataset")
                                                 String datasetIdentifier,
                                                 org.springframework.web.context.request.WebRequest webRequest)
              throws HandleRequestDelegationException,
                     Exception

Throws:

HandleRequestDelegationException

Exception

delete

public String delete(String datasetIdentifier,
                     boolean deletemetadata)
              throws DatabaseException,
                     IOException

Throws:

DatabaseException

IOException

deleteData

protected void deleteData(DataSet dataset)
                   throws DatabaseException

Deletes the data from a given dataSet

Parameters:

the - DataSet from which the data should be deleted

Throws:

DatabaseException

deleteObservedValues

protected void deleteObservedValues(ObservationSet observationSet)
                             throws DatabaseException

Deletes all ObservedValues from a given observationSet

Parameters:

the - observationSet from which the values should be deleted

Throws:

DatabaseException

deleteProtocol

protected List<Protocol> deleteProtocol(Protocol protocol,
                                        List<Protocol> allProtocols)
                                 throws DatabaseException

Deletes all subprotocols which do not have multiple Protocols referencing them

Parameters:

the - protocols that should be deleted

Throws:

DatabaseException

deleteFeatures

protected void deleteFeatures(List<ObservableFeature> features,
                              List<Protocol> allProtocols)
                       throws DatabaseException

Deletes all features which do not have multiple Protocols referencing them

Parameters:

the - features that should be deleted

Throws:

DatabaseException

deleteCategories

protected void deleteCategories(List<Category> categories)
                         throws DatabaseException

Throws:

DatabaseException

countReferringProtocols

protected int countReferringProtocols(Characteristic characteristic,
                                      List<Protocol> allProtocols)

Count the number of times a protocol of feature is referred to from a(n other) protocol

Parameters:

the - feature of protocol that is referred to

Returns:

the number of referring protocols

handleNotAuthenticated

@ExceptionHandler(value=org.molgenis.framework.db.DatabaseAccessException.class)
public String handleNotAuthenticated()