org.molgenis.omx.observ

Class Category

java.lang.Object

org.molgenis.data.support.AbstractEntity

org.molgenis.omx.observ.Characteristic

org.molgenis.omx.observ.Category

All Implemented Interfaces:

Serializable, Entity, Autoid, Identifiable

@Entity
public class Category
extends Characteristic
implements Entity

Category: Category is partOf ObservableFeature to define categories for an ObservableFeature, such as the categorical answer codes that are often used in Questionaires. For example the ObservableFeature 'sex' has {code_string = 1, label=male} and {code_string = 2, label=female}. Category can be linked to well-defined ontology terms via the ontologyReference. Category extends ObservationElement such that it can be referenced by ObservedValue.value. The Category class maps to METABASE::Category .

Author:

MOLGENIS generator

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static String	DEFINITION
static String	ENTITY_NAME
static String	ID
static String	ISMISSING
static String	OBSERVABLEFEATURE
static String	VALUECODE

Fields inherited from class org.molgenis.omx.observ.Characteristic

__TYPE, DESCRIPTION, IDENTIFIER, NAME

Constructor Summary

Constructors

Constructor and Description
Category()

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object obj)
Object	get(String name) Generic getter.
Iterable<String>	getAttributeNames()
OntologyTerm	getDefinition() Get the The category that is being measured in a specific way..
EntityMetaData	getEntityMetaData()
String	getEntityName()
Integer	getIdValue()
Boolean	getIsMissing() Get the whether this value should be treated as missing value..
List<String>	getLabelAttributeNames()
ObservableFeature	getObservableFeature() Get the The Measurement these permitted values are part of..
String	getValueCode() Get the The value used to store this category in ObservedValue.
int	hashCode()
void	set(Entity entity, boolean strict)
void	set(String attributeName, Object value)
void	setDefinition(OntologyTerm definition) Set the The category that is being measured in a specific way..
void	setIsMissing(Boolean isMissing) Set the whether this value should be treated as missing value..
void	setObservableFeature(ObservableFeature observableFeature) Set the The Measurement these permitted values are part of..
void	setValueCode(String valueCode) Set the The value used to store this category in ObservedValue.
String	toString()
String	toString(boolean verbose)

Methods inherited from class org.molgenis.omx.observ.Characteristic

get__Type, get__TypeLabel, get__TypeOptions, getDescription, getId, getIdentifier, getName, getValueMrefValueCollection, set__Type, setDescription, setId, setIdentifier, setName, setValueMrefValueCollection

Methods inherited from class org.molgenis.data.support.AbstractEntity

getBoolean, getDate, getDouble, getEntities, getEntity, getInt, getIntList, getLabelValue, getList, getLong, getString, getTimestamp, getUtilDate, isObjectRepresentation, set, setValuesFromString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.molgenis.data.Entity

getBoolean, getDate, getDouble, getEntities, getEntity, getInt, getIntList, getLabelValue, getList, getLong, getString, getTimestamp, getUtilDate, set

Field Detail

ENTITY_NAME

public static final String ENTITY_NAME

See Also:

Constant Field Values

OBSERVABLEFEATURE

public static final String OBSERVABLEFEATURE

See Also:

Constant Field Values

VALUECODE

public static final String VALUECODE

See Also:

Constant Field Values

DEFINITION

public static final String DEFINITION

See Also:

Constant Field Values

ISMISSING

public static final String ISMISSING

See Also:

Constant Field Values

ID

public static final String ID

See Also:

Constant Field Values

Constructor Detail

Category

public Category()

Method Detail

getEntityName

public String getEntityName()

Overrides:

getEntityName in class Characteristic

getObservableFeature

public ObservableFeature getObservableFeature()

Get the The Measurement these permitted values are part of..

Returns:

observableFeature.

setObservableFeature

public void setObservableFeature(ObservableFeature observableFeature)

Set the The Measurement these permitted values are part of..

Parameters:

observableFeature -

getValueCode

public String getValueCode()

Get the The value used to store this category in ObservedValue. For example '1', '2'..

Returns:

valueCode.

setValueCode

public void setValueCode(String valueCode)

Set the The value used to store this category in ObservedValue. For example '1', '2'..

Parameters:

valueCode -

getDefinition

public OntologyTerm getDefinition()

Get the The category that is being measured in a specific way..

Returns:

definition.

setDefinition

public void setDefinition(OntologyTerm definition)

Set the The category that is being measured in a specific way..

Parameters:

definition -

getIsMissing

public Boolean getIsMissing()

Get the whether this value should be treated as missing value..

Returns:

isMissing.

setIsMissing

public void setIsMissing(Boolean isMissing)

Set the whether this value should be treated as missing value..

Parameters:

isMissing -

get

public Object get(String name)

Generic getter. Get the property by using the name.

Specified by:

get in interface Entity

Overrides:

get in class Characteristic

set

public void set(Entity entity,
       boolean strict)

Specified by:

set in interface Entity

Overrides:

set in class Characteristic

toString

public String toString()

Overrides:

toString in class Characteristic

toString

public String toString(boolean verbose)

Overrides:

toString in class Characteristic

getIdValue

public Integer getIdValue()

Specified by:

getIdValue in interface Entity

Overrides:

getIdValue in class Characteristic

getAttributeNames

public Iterable<String> getAttributeNames()

Specified by:

getAttributeNames in interface Entity

Overrides:

getAttributeNames in class Characteristic

getLabelAttributeNames

public List<String> getLabelAttributeNames()

Specified by:

getLabelAttributeNames in interface Entity

Overrides:

getLabelAttributeNames in class Characteristic

set

public void set(String attributeName,
       Object value)

Specified by:

set in interface Entity

Overrides:

set in class Characteristic

equals

public boolean equals(Object obj)

Overrides:

equals in class Characteristic

hashCode

public int hashCode()

Overrides:

hashCode in class Characteristic

getEntityMetaData

public EntityMetaData getEntityMetaData()

Specified by:

getEntityMetaData in interface Entity

Overrides:

getEntityMetaData in class Characteristic