org.molgenis.omx.observ

Class ObservedValue

java.lang.Object

org.molgenis.data.support.AbstractEntity

org.molgenis.omx.observ.ObservedValue

All Implemented Interfaces:

Serializable, Entity, Autoid

@Entity
public class ObservedValue
extends AbstractEntity
implements Entity, Autoid

ObservedValue: Generic storage of values as part of one observation event. Values are atomatic observations, e.g., length (feature) of individual 1 (valueset.target) = 179cm (value). Values can also be qualified by some characteristic, e.g., QTL p-value (feature) between phenotype 'leaf count' (characteristic) and marker 'PVV4' (valueset.target) = 0.1^10+3 (value). .

Author:

MOLGENIS generator

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static String	ENTITY_NAME
static String	FEATURE
static String	ID
static String	OBSERVATIONSET
static String	VALUE

Constructor Summary

Constructors

Constructor and Description
ObservedValue()

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object obj)
Object	get(String name) Generic getter.
Iterable<String>	getAttributeNames()
EntityMetaData	getEntityMetaData()
String	getEntityName()
ObservableFeature	getFeature() Get the References the ObservableFeature that this observation was made on.
Integer	getId() Get the automatically generated internal id, only for internal use..
Integer	getIdValue()
List<String>	getLabelAttributeNames()
ObservationSet	getObservationSet() Get the Reference to the observation.
Value	getValue() Get the The value observed.
int	hashCode()
void	set(Entity entity, boolean strict)
void	set(String attributeName, Object value)
void	setFeature(ObservableFeature feature) Set the References the ObservableFeature that this observation was made on.
void	setId(Integer id) Set the automatically generated internal id, only for internal use..
void	setObservationSet(ObservationSet observationSet) Set the Reference to the observation.
void	setValue(Value value) Set the The value observed.
String	toString()
String	toString(boolean verbose)

Methods inherited from class org.molgenis.data.support.AbstractEntity

getBoolean, getDate, getDouble, getEntities, getEntity, getInt, getIntList, getLabelValue, getList, getLong, getString, getTimestamp, getUtilDate, isObjectRepresentation, set, setValuesFromString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.molgenis.data.Entity

getBoolean, getDate, getDouble, getEntities, getEntity, getInt, getIntList, getLabelValue, getList, getLong, getString, getTimestamp, getUtilDate, set

Field Detail

ENTITY_NAME

public static final String ENTITY_NAME

See Also:

Constant Field Values

ID

public static final String ID

See Also:

Constant Field Values

OBSERVATIONSET

public static final String OBSERVATIONSET

See Also:

Constant Field Values

FEATURE

public static final String FEATURE

See Also:

Constant Field Values

VALUE

public static final String VALUE

See Also:

Constant Field Values

Constructor Detail

ObservedValue

public ObservedValue()

Method Detail

getEntityName

public String getEntityName()

getId

public Integer getId()

Get the automatically generated internal id, only for internal use..

Specified by:

getId in interface Autoid

Returns:

id.

setId

public void setId(Integer id)

Set the automatically generated internal id, only for internal use..

Specified by:

setId in interface Autoid

Parameters:

id -

getObservationSet

public ObservationSet getObservationSet()

Get the Reference to the observation. For example a particular patient visit or the application of a microarray or the calculation of a QTL model.

Returns:

observationSet.

setObservationSet

public void setObservationSet(ObservationSet observationSet)

Set the Reference to the observation. For example a particular patient visit or the application of a microarray or the calculation of a QTL model.

Parameters:

observationSet -

getFeature

public ObservableFeature getFeature()

Get the References the ObservableFeature that this observation was made on. For example 'probe123'..

Returns:

feature.

setFeature

public void setFeature(ObservableFeature feature)

Set the References the ObservableFeature that this observation was made on. For example 'probe123'..

Parameters:

feature -

getValue

public Value getValue()

Get the The value observed.

Returns:

value.

setValue

public void setValue(Value value)

Set the The value observed.

Parameters:

value -

get

public Object get(String name)

Generic getter. Get the property by using the name.

Specified by:

get in interface Entity

set

public void set(Entity entity,
       boolean strict)

Specified by:

set in interface Entity

toString

public String toString()

Overrides:

toString in class AbstractEntity

toString

public String toString(boolean verbose)

getIdValue

public Integer getIdValue()

Specified by:

getIdValue in interface Entity

getAttributeNames

public Iterable<String> getAttributeNames()

Specified by:

getAttributeNames in interface Entity

getLabelAttributeNames

public List<String> getLabelAttributeNames()

Specified by:

getLabelAttributeNames in interface Entity

set

public void set(String attributeName,
       Object value)

Specified by:

set in interface Entity

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

getEntityMetaData

public EntityMetaData getEntityMetaData()

Specified by:

getEntityMetaData in interface Entity