Uses of Class
org.molgenis.omx.patient.Patient

Packages that use Patient

Package	Description
org.molgenis.omx.das
org.molgenis.omx.patient
org.molgenis.omx.patient.db
org.molgenis.service

Uses of Patient in org.molgenis.omx.das

Methods in org.molgenis.omx.das that return Patient

Modifier and Type	Method and Description
protected Patient	DasOmxDataSource.findPatient(String patient)

Methods in org.molgenis.omx.das with parameters of type Patient

Modifier and Type	Method and Description
protected List<Variant>	DasOmxDataSource.queryVariants(String segmentId, int start, int stop, Patient patientObject)

Uses of Patient in org.molgenis.omx.patient

Methods in org.molgenis.omx.patient that return Patient

Modifier and Type	Method and Description
Patient	Patient.create(Entity entity)
static Patient	Patient.findById(Database db, Integer id)
static Patient	Patient.findByIdentifier(Database db, String identifier)

Methods in org.molgenis.omx.patient that return types with arguments of type Patient

Modifier and Type	Method and Description
static List<? extends Patient>	Patient.find(Database db, QueryRule... rules) Shorthand for db.find(Patient.class, org.molgenis.framework.db.QueryRule ...
static Query<? extends Patient>	Patient.query(Database db) Shorthand for db.query(Patient.class).

Constructors in org.molgenis.omx.patient with parameters of type Patient

Constructor and Description
Patient(Patient copyMe) copy constructor

Uses of Patient in org.molgenis.omx.patient.db

Classes in org.molgenis.omx.patient.db with type parameters of type Patient

Modifier and Type	Class and Description
class	PatientSecurityDecorator<E extends Patient> TODO add column level security filters

Methods in org.molgenis.omx.patient.db that return Patient

Modifier and Type	Method and Description
Patient	PatientJpaMapper.create()

Methods in org.molgenis.omx.patient.db that return types with arguments of type Patient

Modifier and Type	Method and Description
List<Patient>	PatientJpaMapper.createList(int size) Return EMPTY list of given allocated size

Methods in org.molgenis.omx.patient.db with parameters of type Patient

Modifier and Type	Method and Description
void	PatientJpaMapper.create(Patient entity) This method first saves the objects that are being refered to by entity, then the entity itself and finally the objects that refer to this object
void	PatientJpaMapper.destroy(Patient patient)
void	PatientJpaMapper.edit(Patient patient)

Method parameters in org.molgenis.omx.patient.db with type arguments of type Patient

Modifier and Type	Method and Description
int	PatientJpaMapper.executeAdd(List<? extends Patient> entities)
int	PatientJpaMapper.executeRemove(List<? extends Patient> entities)
int	PatientJpaMapper.executeUpdate(List<? extends Patient> entities)
void	PatientJpaMapper.prepareFileAttachements(List<Patient> entities, File baseDir)
void	PatientJpaMapper.resolveForeignKeys(List<Patient> entities)
boolean	PatientJpaMapper.saveFileAttachements(List<Patient> entities, File baseDir)

Uses of Patient in org.molgenis.service

Methods in org.molgenis.service that return Patient

Modifier and Type	Method and Description
Patient	PatientService.create(Patient patient)
Patient	PatientService.read(Integer id)

Methods in org.molgenis.service that return types with arguments of type Patient

Modifier and Type	Method and Description
Iterable<Patient>	PatientService.readAll()
EntityPager<Patient>	PatientService.readAll(int start, int num, List<QueryRule> queryRules)

Methods in org.molgenis.service with parameters of type Patient

Modifier and Type	Method and Description
Patient	PatientService.create(Patient patient)
void	PatientService.update(Patient patient)