Uses of Class
org.molgenis.omx.xgap.ProbeSet

Packages that use ProbeSet

Package	Description
org.molgenis.omx.xgap
org.molgenis.omx.xgap.db
org.molgenis.service

Uses of ProbeSet in org.molgenis.omx.xgap

Methods in org.molgenis.omx.xgap that return ProbeSet

Modifier and Type	Method and Description
ProbeSet	ProbeSet.create(Entity entity)
static ProbeSet	ProbeSet.findById(Database db, Integer id)
static ProbeSet	ProbeSet.findByIdentifier(Database db, String identifier)
ProbeSet	Probe.getProbeSet() Get the Optional: probeset this probe belongs to (e.g., in Affymetrix assays)..
ProbeSet	Probe.getProbeSet(Database db) Deprecated.

Methods in org.molgenis.omx.xgap that return types with arguments of type ProbeSet

Modifier and Type	Method and Description
static List<? extends ProbeSet>	ProbeSet.find(Database db, QueryRule... rules) Shorthand for db.find(ProbeSet.class, org.molgenis.framework.db.QueryRule ...
static Query<? extends ProbeSet>	ProbeSet.query(Database db) Shorthand for db.query(ProbeSet.class).

Methods in org.molgenis.omx.xgap with parameters of type ProbeSet

Modifier and Type	Method and Description
void	Probe.setProbeSet(ProbeSet probeSet) Set the Optional: probeset this probe belongs to (e.g., in Affymetrix assays)..

Constructors in org.molgenis.omx.xgap with parameters of type ProbeSet

Constructor and Description
ProbeSet(ProbeSet copyMe) copy constructor

Uses of ProbeSet in org.molgenis.omx.xgap.db

Classes in org.molgenis.omx.xgap.db with type parameters of type ProbeSet

Modifier and Type	Class and Description
class	ProbeSetSecurityDecorator<E extends ProbeSet> TODO add column level security filters

Methods in org.molgenis.omx.xgap.db that return ProbeSet

Modifier and Type	Method and Description
ProbeSet	ProbeSetJpaMapper.create()

Methods in org.molgenis.omx.xgap.db that return types with arguments of type ProbeSet

Modifier and Type	Method and Description
List<ProbeSet>	ProbeSetJpaMapper.createList(int size) Return EMPTY list of given allocated size

Methods in org.molgenis.omx.xgap.db with parameters of type ProbeSet

Modifier and Type	Method and Description
void	ProbeSetJpaMapper.create(ProbeSet entity) This method first saves the objects that are being refered to by entity, then the entity itself and finally the objects that refer to this object
void	ProbeSetJpaMapper.destroy(ProbeSet probeSet)
void	ProbeSetJpaMapper.edit(ProbeSet probeSet)

Method parameters in org.molgenis.omx.xgap.db with type arguments of type ProbeSet

Modifier and Type	Method and Description
int	ProbeSetJpaMapper.executeAdd(List<? extends ProbeSet> entities)
int	ProbeSetJpaMapper.executeRemove(List<? extends ProbeSet> entities)
int	ProbeSetJpaMapper.executeUpdate(List<? extends ProbeSet> entities)
void	ProbeSetJpaMapper.prepareFileAttachements(List<ProbeSet> entities, File baseDir)
void	ProbeSetJpaMapper.resolveForeignKeys(List<ProbeSet> entities)
boolean	ProbeSetJpaMapper.saveFileAttachements(List<ProbeSet> entities, File baseDir)

Uses of ProbeSet in org.molgenis.service

Methods in org.molgenis.service that return ProbeSet

Modifier and Type	Method and Description
ProbeSet	ProbeSetService.create(ProbeSet probeSet)
ProbeSet	ProbeSetService.read(Integer id)

Methods in org.molgenis.service that return types with arguments of type ProbeSet

Modifier and Type	Method and Description
Iterable<ProbeSet>	ProbeSetService.readAll()
EntityPager<ProbeSet>	ProbeSetService.readAll(int start, int num, List<QueryRule> queryRules)

Methods in org.molgenis.service with parameters of type ProbeSet

Modifier and Type	Method and Description
ProbeSet	ProbeSetService.create(ProbeSet probeSet)
void	ProbeSetService.update(ProbeSet probeSet)