Uses of Class
org.molgenis.omx.xgap.Protein

Packages that use Protein

Package	Description
org.molgenis.omx.xgap
org.molgenis.omx.xgap.db
org.molgenis.service

Uses of Protein in org.molgenis.omx.xgap

Methods in org.molgenis.omx.xgap that return Protein

Modifier and Type	Method and Description
Protein	Protein.create(Entity entity)
static Protein	Protein.findById(Database db, Integer id)
static Protein	Protein.findByIdentifier(Database db, String identifier)

Methods in org.molgenis.omx.xgap that return types with arguments of type Protein

Modifier and Type	Method and Description
static List<? extends Protein>	Protein.find(Database db, QueryRule... rules) Shorthand for db.find(Protein.class, org.molgenis.framework.db.QueryRule ...
static Query<? extends Protein>	Protein.query(Database db) Shorthand for db.query(Protein.class).

Constructors in org.molgenis.omx.xgap with parameters of type Protein

Constructor and Description
Protein(Protein copyMe) copy constructor

Uses of Protein in org.molgenis.omx.xgap.db

Classes in org.molgenis.omx.xgap.db with type parameters of type Protein

Modifier and Type	Class and Description
class	ProteinSecurityDecorator<E extends Protein> TODO add column level security filters

Methods in org.molgenis.omx.xgap.db that return Protein

Modifier and Type	Method and Description
Protein	ProteinJpaMapper.create()

Methods in org.molgenis.omx.xgap.db that return types with arguments of type Protein

Modifier and Type	Method and Description
List<Protein>	ProteinJpaMapper.createList(int size) Return EMPTY list of given allocated size

Methods in org.molgenis.omx.xgap.db with parameters of type Protein

Modifier and Type	Method and Description
void	ProteinJpaMapper.create(Protein entity) This method first saves the objects that are being refered to by entity, then the entity itself and finally the objects that refer to this object
void	ProteinJpaMapper.destroy(Protein protein)
void	ProteinJpaMapper.edit(Protein protein)

Method parameters in org.molgenis.omx.xgap.db with type arguments of type Protein

Modifier and Type	Method and Description
int	ProteinJpaMapper.executeAdd(List<? extends Protein> entities)
int	ProteinJpaMapper.executeRemove(List<? extends Protein> entities)
int	ProteinJpaMapper.executeUpdate(List<? extends Protein> entities)
void	ProteinJpaMapper.prepareFileAttachements(List<Protein> entities, File baseDir)
void	ProteinJpaMapper.resolveForeignKeys(List<Protein> entities)
boolean	ProteinJpaMapper.saveFileAttachements(List<Protein> entities, File baseDir)

Uses of Protein in org.molgenis.service

Methods in org.molgenis.service that return Protein

Modifier and Type	Method and Description
Protein	ProteinService.create(Protein protein)
Protein	ProteinService.read(Integer id)

Methods in org.molgenis.service that return types with arguments of type Protein

Modifier and Type	Method and Description
Iterable<Protein>	ProteinService.readAll()
EntityPager<Protein>	ProteinService.readAll(int start, int num, List<QueryRule> queryRules)

Methods in org.molgenis.service with parameters of type Protein

Modifier and Type	Method and Description
Protein	ProteinService.create(Protein protein)
void	ProteinService.update(Protein protein)