Uses of Class
org.molgenis.omx.xgap.SNP

Packages that use SNP

Package	Description
org.molgenis.omx.xgap
org.molgenis.omx.xgap.db
org.molgenis.service

Uses of SNP in org.molgenis.omx.xgap

Methods in org.molgenis.omx.xgap that return SNP

Modifier and Type	Method and Description
SNP	SNP.create(Entity entity)
static SNP	SNP.findById(Database db, Integer id)
static SNP	SNP.findByIdentifier(Database db, String identifier)
SNP	SNP_Polymorphism.getSNP() Get the .
SNP	SNP_Polymorphism.getSNP(Database db) Deprecated.

Methods in org.molgenis.omx.xgap that return types with arguments of type SNP

Modifier and Type	Method and Description
static List<? extends SNP>	SNP.find(Database db, QueryRule... rules) Shorthand for db.find(SNP.class, org.molgenis.framework.db.QueryRule ...
Collection<SNP>	Polymorphism.getPolymorphismSNPCollection()
Collection<SNP>	Polymorphism.getPolymorphismSNPCollection(Database db)
static Query<? extends SNP>	SNP.query(Database db) Shorthand for db.query(SNP.class).

Methods in org.molgenis.omx.xgap with parameters of type SNP

Modifier and Type	Method and Description
void	SNP_Polymorphism.setSNP(SNP sNP) Set the .

Method parameters in org.molgenis.omx.xgap with type arguments of type SNP

Modifier and Type	Method and Description
void	Polymorphism.setPolymorphismSNPCollection(Collection<SNP> collection)

Constructors in org.molgenis.omx.xgap with parameters of type SNP

Constructor and Description
SNP(SNP copyMe) copy constructor

Uses of SNP in org.molgenis.omx.xgap.db

Classes in org.molgenis.omx.xgap.db with type parameters of type SNP

Modifier and Type	Class and Description
class	SNPSecurityDecorator<E extends SNP> TODO add column level security filters

Methods in org.molgenis.omx.xgap.db that return SNP

Modifier and Type	Method and Description
SNP	SNPJpaMapper.create()

Methods in org.molgenis.omx.xgap.db that return types with arguments of type SNP

Modifier and Type	Method and Description
List<SNP>	SNPJpaMapper.createList(int size) Return EMPTY list of given allocated size

Methods in org.molgenis.omx.xgap.db with parameters of type SNP

Modifier and Type	Method and Description
void	SNPJpaMapper.create(SNP entity) This method first saves the objects that are being refered to by entity, then the entity itself and finally the objects that refer to this object
void	SNPJpaMapper.destroy(SNP sNP)
void	SNPJpaMapper.edit(SNP sNP)

Method parameters in org.molgenis.omx.xgap.db with type arguments of type SNP

Modifier and Type	Method and Description
int	SNPJpaMapper.executeAdd(List<? extends SNP> entities)
int	SNPJpaMapper.executeRemove(List<? extends SNP> entities)
int	SNPJpaMapper.executeUpdate(List<? extends SNP> entities)
void	SNPJpaMapper.prepareFileAttachements(List<SNP> entities, File baseDir)
void	SNPJpaMapper.resolveForeignKeys(List<SNP> entities)
boolean	SNPJpaMapper.saveFileAttachements(List<SNP> entities, File baseDir)

Uses of SNP in org.molgenis.service

Methods in org.molgenis.service that return SNP

Modifier and Type	Method and Description
SNP	SNPService.create(SNP sNP)
SNP	SNPService.read(Integer id)

Methods in org.molgenis.service that return types with arguments of type SNP

Modifier and Type	Method and Description
Iterable<SNP>	SNPService.readAll()
EntityPager<SNP>	SNPService.readAll(int start, int num, List<QueryRule> queryRules)

Methods in org.molgenis.service with parameters of type SNP

Modifier and Type	Method and Description
SNP	SNPService.create(SNP sNP)
void	SNPService.update(SNP sNP)