org.molgenis.omx.xgap

Interface Locus

All Superinterfaces:

Entity, Serializable

All Known Implementing Classes:

Clone, Gene, Marker, Probe, ProbeSet, SNP, Spot, Variant

public interface Locus
extends Entity

Locus: position. Typical examples of such traits are genes, probes and markers. Common structure for entities that have a genomic.

Author:

MOLGENIS generator

Method Summary

Methods

Modifier and Type	Method and Description
Long	getBpEnd()
Long	getBpStart()
Chromosome	getChromosome()
Double	getCM()
String	getSeq()
String	getSymbol()
void	setBpEnd(Long bpEnd)
void	setBpStart(Long bpStart)
void	setChromosome(Chromosome chromosome)
void	setCM(Double cM)
void	setSeq(String seq)
void	setSymbol(String symbol)

Methods inherited from interface org.molgenis.data.Entity

get, getAttributeNames, getBoolean, getDate, getDouble, getEntities, getEntity, getEntityMetaData, getIdValue, getInt, getIntList, getLabelAttributeNames, getLabelValue, getList, getLong, getString, getTimestamp, getUtilDate, set, set, set

Method Detail

getChromosome

Chromosome getChromosome()

setChromosome

void setChromosome(Chromosome chromosome)

getCM

Double getCM()

setCM

void setCM(Double cM)

getBpStart

Long getBpStart()

setBpStart

void setBpStart(Long bpStart)

getBpEnd

Long getBpEnd()

setBpEnd

void setBpEnd(Long bpEnd)

getSeq

String getSeq()

setSeq

void setSeq(String seq)

getSymbol

String getSymbol()

setSymbol

void setSymbol(String symbol)