A B C D E F G H I K L M N O P R S T U V X 

A

AccessionSecurityDecorator<E extends Accession> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
AccessionSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
add(List<E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 

B

BoolValueSecurityDecorator<E extends BoolValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
BoolValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
BROWSERLINKS - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 

C

CategoricalValueSecurityDecorator<E extends CategoricalValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
CategoricalValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
CategorySecurityDecorator<E extends Category> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
CategorySecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
CHAINS - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
CharacteristicSecurityDecorator<E extends Characteristic> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
CharacteristicSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
ChromosomeSecurityDecorator<E extends Chromosome> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
ChromosomeSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
CloneSecurityDecorator<E extends Clone> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
CloneSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
COORDSYSTEM - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
count(QueryRule...) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
count(QueryRule...) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
createFindSqlInclRules(QueryRule[]) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 

D

DataSetSecurityDecorator<E extends DataSet> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
DataSetSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
DateTimeValueSecurityDecorator<E extends DateTimeValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
DateTimeValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
DateValueSecurityDecorator<E extends DateValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
DateValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
DecimalValueSecurityDecorator<E extends DecimalValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
DecimalValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
DerivedTraitSecurityDecorator<E extends DerivedTrait> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
DerivedTraitSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 

E

EmailValueSecurityDecorator<E extends EmailValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
EmailValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
EnvironmentalFactorSecurityDecorator<E extends EnvironmentalFactor> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
EnvironmentalFactorSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
executeAdd(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
executeRemove(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
executeUpdate(List<? extends E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 

F

find(QueryRule...) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
find(QueryRule...) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
findById(Object) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 

G

GeneSecurityDecorator<E extends Gene> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
GeneSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
GenomebrowserController - Class in org.molgenis.genomebrowser.controller
Controller that handles home page requests
GenomebrowserController(MolgenisSettings, MutationService) - Constructor for class org.molgenis.genomebrowser.controller.GenomebrowserController
 
getAll(HttpServletResponse, String, String) - Method in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
getPatientMutationData(String, String) - Method in class org.molgenis.genomebrowser.services.MutationService
 

H

HtmlValueSecurityDecorator<E extends HtmlValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
HtmlValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
HyperlinkValueSecurityDecorator<E extends HyperlinkValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
HyperlinkValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 

I

ID - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
IndividualSecurityDecorator<E extends Individual> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
IndividualSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
init(Model) - Method in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
INITLOCATION - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
InstituteSecurityDecorator<E extends Institute> - Class in org.molgenis.omx.auth.db
TODO add column level security filters
InstituteSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
IntValueSecurityDecorator<E extends IntValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
IntValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 

K

KARYOTYPEENDPOINT - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 

L

LongValueSecurityDecorator<E extends LongValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
LongValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 

M

MarkerSecurityDecorator<E extends Marker> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
MarkerSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
MassPeakSecurityDecorator<E extends MassPeak> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
MassPeakSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
MetaboliteSecurityDecorator<E extends Metabolite> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
MetaboliteSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
MolgenisEntitySecurityDecorator<E extends MolgenisEntity> - Class in org.molgenis.omx.core.db
TODO add column level security filters
MolgenisEntitySecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
MolgenisFileSecurityDecorator<E extends MolgenisFile> - Class in org.molgenis.omx.core.db
TODO add column level security filters
MolgenisFileSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
MrefValueSecurityDecorator<E extends MrefValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
MrefValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
mutationService - Variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
MutationService - Class in org.molgenis.genomebrowser.services
 
MutationService(Database) - Constructor for class org.molgenis.genomebrowser.services.MutationService
 

N

NMRBinSecurityDecorator<E extends NMRBin> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
NMRBinSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 

O

ObservableFeatureSecurityDecorator<E extends ObservableFeature> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
ObservableFeatureSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
ObservationSetSecurityDecorator<E extends ObservationSet> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
ObservationSetSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
ObservationTargetSecurityDecorator<E extends ObservationTarget> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
ObservationTargetSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
ObservedValueSecurityDecorator<E extends ObservedValue> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
ObservedValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
OntologySecurityDecorator<E extends Ontology> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
OntologySecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
OntologyTermSecurityDecorator<E extends OntologyTerm> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
OntologyTermSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
org.molgenis.genomebrowser.controller - package org.molgenis.genomebrowser.controller
 
org.molgenis.genomebrowser.services - package org.molgenis.genomebrowser.services
 
org.molgenis.omx.auth.db - package org.molgenis.omx.auth.db
 
org.molgenis.omx.core.db - package org.molgenis.omx.core.db
 
org.molgenis.omx.observ.db - package org.molgenis.omx.observ.db
 
org.molgenis.omx.observ.target.db - package org.molgenis.omx.observ.target.db
 
org.molgenis.omx.observ.value.db - package org.molgenis.omx.observ.value.db
 
org.molgenis.omx.patient.db - package org.molgenis.omx.patient.db
 
org.molgenis.omx.xgap.db - package org.molgenis.omx.xgap.db
 

P

PairedSampleSecurityDecorator<E extends PairedSample> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
PairedSampleSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
PanelSecurityDecorator<E extends Panel> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
PanelSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
PanelSourceSecurityDecorator<E extends PanelSource> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
PanelSourceSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
PatientSecurityDecorator<E extends Patient> - Class in org.molgenis.omx.patient.db
TODO add column level security filters
PatientSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
PersonRoleSecurityDecorator<E extends PersonRole> - Class in org.molgenis.omx.auth.db
TODO add column level security filters
PersonRoleSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
PersonSecurityDecorator<E extends Person> - Class in org.molgenis.omx.auth.db
TODO add column level security filters
PersonSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
PolymorphismSecurityDecorator<E extends Polymorphism> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
PolymorphismSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
ProbeSecurityDecorator<E extends Probe> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
ProbeSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
ProbeSetSecurityDecorator<E extends ProbeSet> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
ProbeSetSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
ProteinSecurityDecorator<E extends Protein> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
ProteinSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
ProtocolSecurityDecorator<E extends Protocol> - Class in org.molgenis.omx.observ.db
TODO add column level security filters
ProtocolSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 

R

remove(List<E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
remove(List<E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
resolveForeignKeys(List<E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
RuntimePropertySecurityDecorator<E extends RuntimeProperty> - Class in org.molgenis.omx.core.db
TODO add column level security filters
RuntimePropertySecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 

S

SampleSecurityDecorator<E extends Sample> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
SampleSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
SEARCHENDPOINT - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
SNPSecurityDecorator<E extends SNP> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
SNPSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
SOURCES - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 
SpeciesSecurityDecorator<E extends Species> - Class in org.molgenis.omx.observ.target.db
TODO add column level security filters
SpeciesSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
SpotSecurityDecorator<E extends Spot> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
SpotSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
StringValueSecurityDecorator<E extends StringValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
StringValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 

T

TextValueSecurityDecorator<E extends TextValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
TextValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
TrackSecurityDecorator<E extends Track> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
TrackSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
TranscriptSecurityDecorator<E extends Transcript> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
TranscriptSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 

U

update(List<E>) - Method in class org.molgenis.omx.auth.db.InstituteSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.auth.db.PersonRoleSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.auth.db.PersonSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisEntitySecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.core.db.MolgenisFileSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.core.db.RuntimePropertySecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.CategorySecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.CharacteristicSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.DataSetSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.ObservableFeatureSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationSetSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.ObservationTargetSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.ObservedValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.db.ProtocolSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.AccessionSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.IndividualSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologySecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.OntologyTermSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.PanelSourceSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.target.db.SpeciesSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.BoolValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.CategoricalValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateTimeValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.DateValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.DecimalValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.EmailValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.HtmlValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.HyperlinkValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.IntValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.LongValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.MrefValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.StringValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.TextValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.patient.db.PatientSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.ChromosomeSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.CloneSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.DerivedTraitSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.EnvironmentalFactorSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.GeneSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.MarkerSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.MassPeakSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.MetaboliteSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.NMRBinSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.PairedSampleSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.PolymorphismSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.ProbeSetSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.ProteinSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.SampleSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.SNPSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.SpotSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.TrackSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.TranscriptSecurityDecorator
 
update(List<E>) - Method in class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 
URI - Static variable in class org.molgenis.genomebrowser.controller.GenomebrowserController
 

V

ValueSecurityDecorator<E extends Value> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
ValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.ValueSecurityDecorator
 
VariantSecurityDecorator<E extends Variant> - Class in org.molgenis.omx.xgap.db
TODO add column level security filters
VariantSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.xgap.db.VariantSecurityDecorator
 

X

XrefValueSecurityDecorator<E extends XrefValue> - Class in org.molgenis.omx.observ.value.db
TODO add column level security filters
XrefValueSecurityDecorator(Mapper<E>) - Constructor for class org.molgenis.omx.observ.value.db.XrefValueSecurityDecorator
 
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