org.molgenis.genomebrowser.controller

Class GenomebrowserController

java.lang.Object

org.molgenis.framework.ui.MolgenisPluginController

org.molgenis.genomebrowser.controller.GenomebrowserController

@Controller
@RequestMapping(value="/plugin/genomebrowser")
public class GenomebrowserController
extends MolgenisPluginController

Controller that handles home page requests

Field Summary

Fields

Modifier and Type	Field and Description
static String	BROWSERLINKS
static String	CHAINS
static String	COORDSYSTEM
static String	ID
static String	INITLOCATION
static String	KARYOTYPEENDPOINT
MutationService	mutationService
static String	SEARCHENDPOINT
static String	SOURCES
static String	URI

Fields inherited from class org.molgenis.framework.ui.MolgenisPluginController

PLUGIN_URI_PREFIX

Constructor Summary

Constructors

Constructor and Description
GenomebrowserController(MolgenisSettings molgenisSettings, MutationService service)

Method Summary

Methods

Modifier and Type	Method and Description
List<Map<String,String>>	getAll(javax.servlet.http.HttpServletResponse response, String mutationId, String segmentId)
String	init(org.springframework.ui.Model model)

Methods inherited from class org.molgenis.framework.ui.MolgenisPluginController

getId, getUri

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ID

public static final String ID

See Also:

Constant Field Values

URI

public static final String URI

See Also:

Constant Field Values

INITLOCATION

public static final String INITLOCATION

See Also:

Constant Field Values

COORDSYSTEM

public static final String COORDSYSTEM

See Also:

Constant Field Values

CHAINS

public static final String CHAINS

See Also:

Constant Field Values

SOURCES

public static final String SOURCES

See Also:

Constant Field Values

BROWSERLINKS

public static final String BROWSERLINKS

See Also:

Constant Field Values

SEARCHENDPOINT

public static final String SEARCHENDPOINT

See Also:

Constant Field Values

KARYOTYPEENDPOINT

public static final String KARYOTYPEENDPOINT

See Also:

Constant Field Values

mutationService

public MutationService mutationService

Constructor Detail

GenomebrowserController

@Autowired
public GenomebrowserController(MolgenisSettings molgenisSettings,
                                 MutationService service)

Method Detail

init

@RequestMapping(method=GET)
public String init(org.springframework.ui.Model model)

getAll

@RequestMapping(method=GET,
                value="/data",
                produces="application/json")
@ResponseBody
public List<Map<String,String>> getAll(javax.servlet.http.HttpServletResponse response,
                                                          @RequestParam(value="mutation",required=false)
                                                          String mutationId,
                                                          @RequestParam(value="segment",required=true)
                                                          String segmentId)
                                throws ParseException,
                                       DatabaseException,
                                       IOException

Throws:

ParseException

DatabaseException

IOException