A C D G H I L N O P R S U V W

A

addPage(WizardPage) - Method in class org.molgenis.omx.plugins.ImportWizard

C

countReferringProtocols(Characteristic, List<Protocol>) - Method in class org.molgenis.importer.controller.DataSetDeleterController

Count the number of times a protocol of feature is referred to from a(n other) protocol

D

DataSetDeleterController - Class in org.molgenis.importer.controller

DataSetDeleterController() - Constructor for class org.molgenis.importer.controller.DataSetDeleterController

DataSetDeleterPlugin - Class in org.molgenis.omx.plugins

DataSetDeleterPlugin(String, ScreenController<?>) - Constructor for class org.molgenis.omx.plugins.DataSetDeleterPlugin

DataSetImporter - Class in org.molgenis.omx.dataset

DataSetImporter(Database) - Constructor for class org.molgenis.omx.dataset.DataSetImporter

decrementPage() - Method in class org.molgenis.omx.plugins.WizardModel

delete(String, WebRequest) - Method in class org.molgenis.importer.controller.DataSetDeleterController

delete(String, boolean) - Method in class org.molgenis.importer.controller.DataSetDeleterController

deleteCategories(List<Category>) - Method in class org.molgenis.importer.controller.DataSetDeleterController

deleteData(DataSet) - Method in class org.molgenis.importer.controller.DataSetDeleterController

Deletes the data from a given dataSet

deleteFeatures(List<ObservableFeature>, List<Protocol>) - Method in class org.molgenis.importer.controller.DataSetDeleterController

Deletes all features which do not have multiple Protocols referencing them

deleteObservedValues(ObservationSet) - Method in class org.molgenis.importer.controller.DataSetDeleterController

Deletes all ObservedValues from a given observationSet

deleteProtocol(Protocol, List<Protocol>) - Method in class org.molgenis.importer.controller.DataSetDeleterController

Deletes all subprotocols which do not have multiple Protocols referencing them

G

getCurrentPage() - Method in class org.molgenis.omx.plugins.ImportWizard

getCurrentPageIndex() - Method in class org.molgenis.omx.plugins.ImportWizard

getCustomHtmlHeaders() - Method in class org.molgenis.omx.plugins.ImportWizardController

getDataImportable() - Method in class org.molgenis.omx.plugins.ImportWizard

getEntitiesImportable() - Method in class org.molgenis.omx.plugins.ImportWizard

getEntityImportOption() - Method in class org.molgenis.omx.plugins.ImportWizard

getErrorMessage() - Method in class org.molgenis.omx.plugins.ImportWizard

getFieldsAvailable() - Method in class org.molgenis.omx.plugins.ImportWizard

getFieldsDetected() - Method in class org.molgenis.omx.plugins.ImportWizard

getFieldsRequired() - Method in class org.molgenis.omx.plugins.ImportWizard

getFieldsUnknown() - Method in class org.molgenis.omx.plugins.ImportWizard

getFile() - Method in class org.molgenis.omx.plugins.ImportWizard

getIframeSrc() - Method in class org.molgenis.omx.plugins.DataSetDeleterPlugin

getImportResult() - Method in class org.molgenis.omx.plugins.ImportWizard

getNrPages() - Method in class org.molgenis.omx.plugins.WizardModel

getPage() - Method in class org.molgenis.omx.plugins.WizardModel

getPages() - Method in class org.molgenis.omx.plugins.ImportWizard

getSuccessMessage() - Method in class org.molgenis.omx.plugins.ImportWizard

getTitle() - Method in class org.molgenis.omx.plugins.WizardPage

getValidationMessage() - Method in class org.molgenis.omx.plugins.ImportWizard

getViewName() - Method in class org.molgenis.omx.plugins.ImportWizardController

getViewTemplate() - Method in class org.molgenis.omx.plugins.ImportWizardController

getViewTemplate() - Method in class org.molgenis.omx.plugins.WizardPage

getWizard() - Method in class org.molgenis.omx.plugins.ImportWizardController

getWizard() - Method in class org.molgenis.omx.plugins.WizardPage

H

handleNotAuthenticated() - Method in class org.molgenis.importer.controller.DataSetDeleterController

handleRequest(Database, MolgenisRequest) - Method in class org.molgenis.omx.plugins.ImportWizardController

handleRequest(Database, MolgenisRequest) - Method in class org.molgenis.omx.plugins.UploadWizardPage

handleRequest(Database, MolgenisRequest) - Method in class org.molgenis.omx.plugins.ValidationResultWizardPage

handleRequest(Database, MolgenisRequest) - Method in class org.molgenis.omx.plugins.WizardPage

I

importDataSet(File, List<String>) - Method in class org.molgenis.omx.dataset.DataSetImporter

ImportResultsWizardPage - Class in org.molgenis.omx.plugins

ImportResultsWizardPage() - Constructor for class org.molgenis.omx.plugins.ImportResultsWizardPage

ImportWizard - Class in org.molgenis.omx.plugins

Import wizard model

ImportWizard() - Constructor for class org.molgenis.omx.plugins.ImportWizard

ImportWizardController - Class in org.molgenis.omx.plugins

Import wizard controller

ImportWizardController(String, ScreenController<?>) - Constructor for class org.molgenis.omx.plugins.ImportWizardController

incrementPage() - Method in class org.molgenis.omx.plugins.WizardModel

init(Model) - Method in class org.molgenis.importer.controller.DataSetDeleterController

isDisableBack() - Method in class org.molgenis.omx.plugins.WizardModel

isDisableNext() - Method in class org.molgenis.omx.plugins.WizardModel

isFirstPage() - Method in class org.molgenis.omx.plugins.ImportWizard

isFirstPage() - Method in class org.molgenis.omx.plugins.WizardModel

isLastPage() - Method in class org.molgenis.omx.plugins.ImportWizard

isLastPage() - Method in class org.molgenis.omx.plugins.WizardModel

L

logger - Variable in class org.molgenis.omx.plugins.WizardPage

N

next() - Method in class org.molgenis.omx.plugins.ImportWizard

O

org.molgenis.importer.controller - package org.molgenis.importer.controller

org.molgenis.omx.dataset - package org.molgenis.omx.dataset

org.molgenis.omx.plugins - package org.molgenis.omx.plugins

P

previous() - Method in class org.molgenis.omx.plugins.ImportWizard

R

reload(Database) - Method in class org.molgenis.omx.plugins.ImportWizardController

S

setCurrentPageIndex(int) - Method in class org.molgenis.omx.plugins.ImportWizard

setDataImportable(Map<String, Boolean>) - Method in class org.molgenis.omx.plugins.ImportWizard

setDisableBack(boolean) - Method in class org.molgenis.omx.plugins.WizardModel

setDisableNext(boolean) - Method in class org.molgenis.omx.plugins.WizardModel

setEntitiesImportable(Map<String, Boolean>) - Method in class org.molgenis.omx.plugins.ImportWizard

setEntityImportOption(String) - Method in class org.molgenis.omx.plugins.ImportWizard

setErrorMessage(String) - Method in class org.molgenis.omx.plugins.ImportWizard

setFieldsAvailable(Map<String, Collection<String>>) - Method in class org.molgenis.omx.plugins.ImportWizard

setFieldsDetected(Map<String, Collection<String>>) - Method in class org.molgenis.omx.plugins.ImportWizard

setFieldsRequired(Map<String, Collection<String>>) - Method in class org.molgenis.omx.plugins.ImportWizard

setFieldsUnknown(Map<String, Collection<String>>) - Method in class org.molgenis.omx.plugins.ImportWizard

setFile(File) - Method in class org.molgenis.omx.plugins.ImportWizard

setImportResult(EntityImportReport) - Method in class org.molgenis.omx.plugins.ImportWizard

setPage(int) - Method in class org.molgenis.omx.plugins.WizardModel

setPages(List<WizardPage>) - Method in class org.molgenis.omx.plugins.ImportWizard

setSuccessMessage(String) - Method in class org.molgenis.omx.plugins.ImportWizard

setValidationMessage(String) - Method in class org.molgenis.omx.plugins.ImportWizard

setWizard(ImportWizard) - Method in class org.molgenis.omx.plugins.WizardPage

U

UploadWizardPage - Class in org.molgenis.omx.plugins

UploadWizardPage() - Constructor for class org.molgenis.omx.plugins.UploadWizardPage

URI - Static variable in class org.molgenis.importer.controller.DataSetDeleterController

V

ValidationResultWizardPage - Class in org.molgenis.omx.plugins

ValidationResultWizardPage() - Constructor for class org.molgenis.omx.plugins.ValidationResultWizardPage

W

WizardModel - Class in org.molgenis.omx.plugins

WizardModel(int) - Constructor for class org.molgenis.omx.plugins.WizardModel

WizardPage - Class in org.molgenis.omx.plugins

WizardPage(String) - Constructor for class org.molgenis.omx.plugins.WizardPage

A C D G H I L N O P R S U V W