Uses of Class
org.molgenis.pathways.model.Pathway

Packages that use Pathway

Package	Description
org.molgenis.pathways
org.molgenis.pathways.model
org.molgenis.pathways.service

Uses of Pathway in org.molgenis.pathways

Methods in org.molgenis.pathways that return types with arguments of type Pathway

Modifier and Type	Method and Description
Collection<Pathway>	WikiPathwaysController.getAllPathways() Retrieves all pathways.
Collection<Pathway>	WikiPathwaysController.getFilteredPathways(String searchTerm) Searches pathways.
Collection<Pathway>	WikiPathwaysController.getListOfPathwayNamesByGenes(String selectedVcf) Retrieves all pathways for the genes in a vcf.

Uses of Pathway in org.molgenis.pathways.model

Methods in org.molgenis.pathways.model that return Pathway

Modifier and Type	Method and Description
static Pathway	Pathway.create(String id, String name)
static Pathway	Pathway.create(WSPathwayInfo p)
static Pathway	Pathway.create(WSSearchResult p)

Uses of Pathway in org.molgenis.pathways.service

Methods in org.molgenis.pathways.service that return types with arguments of type Pathway

Modifier and Type	Method and Description
Collection<Pathway>	WikiPathwaysService.getAllPathways(String species) Retrieves all pathways for a species.
Collection<Pathway>	WikiPathwaysService.getFilteredPathways(String searchTerm, String species) Searches pathways.
Collection<Pathway>	WikiPathwaysService.getPathwaysForGene(String gene, String species) Retrieves pathways according to gene, filtered for a certain species.
static <Params,Result> com.google.common.cache.LoadingCache<Params,Set<Pathway>>	CacheFactory.loadingPathwayCache(RemoteFunction<Params,Result[]> loader, BiPredicate<Params,Result> filter, Function<Result,Pathway> pathwayTransformer) Creates a LoadingCache for Pathways

Method parameters in org.molgenis.pathways.service with type arguments of type Pathway

Modifier and Type	Method and Description
static <Params,Result> com.google.common.cache.LoadingCache<Params,Set<Pathway>>	CacheFactory.loadingPathwayCache(RemoteFunction<Params,Result[]> loader, BiPredicate<Params,Result> filter, Function<Result,Pathway> pathwayTransformer) Creates a LoadingCache for Pathways