E G M O R S T

E

executeScript(File, ROutputHandler) - Method in class org.molgenis.r.RScriptExecutor

Execute a r script and wait for it to finish

G

getOrder() - Method in class org.molgenis.r.RScriptRegistrator

M

MolgenisRController - Class in org.molgenis.r

Returns the molgenis R api client script

MolgenisRController() - Constructor for class org.molgenis.r.MolgenisRController

MolgenisRException - Exception in org.molgenis.r

MolgenisRException() - Constructor for exception org.molgenis.r.MolgenisRException

MolgenisRException(String) - Constructor for exception org.molgenis.r.MolgenisRException

MolgenisRException(Throwable) - Constructor for exception org.molgenis.r.MolgenisRException

MolgenisRException(String, Throwable) - Constructor for exception org.molgenis.r.MolgenisRException

O

onApplicationEvent(ContextRefreshedEvent) - Method in class org.molgenis.r.RScriptRegistrator

org.molgenis.r - package org.molgenis.r

outputReceived(String) - Method in interface org.molgenis.r.ROutputHandler

outputReceived(String) - Method in class org.molgenis.r.StringROutputHandler

R

ROutputHandler - Interface in org.molgenis.r

RScriptExecutor - Class in org.molgenis.r

Executes a r script with the RScript executable in a new process.

RScriptExecutor(String, String) - Constructor for class org.molgenis.r.RScriptExecutor

RScriptRegistrator - Class in org.molgenis.r

RScriptRegistrator(ScriptRunnerFactory, RScriptRunner) - Constructor for class org.molgenis.r.RScriptRegistrator

RScriptRunner - Class in org.molgenis.r

RScriptRunner(RScriptExecutor, FileStore, FreeMarkerConfigurer) - Constructor for class org.molgenis.r.RScriptRunner

RStreamHandler - Class in org.molgenis.r

RStreamHandler(InputStream, ROutputHandler) - Constructor for class org.molgenis.r.RStreamHandler

run() - Method in class org.molgenis.r.RStreamHandler

runRScript(String, Map<String, Object>, ROutputHandler) - Method in class org.molgenis.r.RScriptRunner

Run an R script as freemarker template

runRScript(String, String, Map<String, Object>, ROutputHandler) - Method in class org.molgenis.r.RScriptRunner

Run an R script as freemarker template

runRScript(String, ROutputHandler) - Method in class org.molgenis.r.RScriptRunner

Run an R script as string

runRScript(File, ROutputHandler) - Method in class org.molgenis.r.RScriptRunner

Run an R script

runScript(Script, Map<String, Object>) - Method in class org.molgenis.r.RScriptRunner

S

showMolgenisRApiClient(HttpServletRequest, Model) - Method in class org.molgenis.r.MolgenisRController

start() - Method in class org.molgenis.r.RStreamHandler

StringROutputHandler - Class in org.molgenis.r

StringROutputHandler() - Constructor for class org.molgenis.r.StringROutputHandler

T

toString() - Method in class org.molgenis.r.StringROutputHandler

E G M O R S T