A B C D E F G H I M N O P R S T U V W
All Classes All Packages

A

AclClassService - Interface in org.molgenis.security.acl

Provides retrieval of Acl classes.

ADD - org.molgenis.security.core.SecurityContextUpdateAction.Type

addMapping(Permission, PermissionSet...) - Method in class org.molgenis.security.core.PermissionRegistry

ANONYMOUS_USERNAME - Static variable in class org.molgenis.security.core.utils.SecurityUtils

aroundAdvice(ProceedingJoinPoint) - Method in class org.molgenis.security.core.runas.RunAsSystemAspect

AuthenticationAuthoritiesUpdater - Interface in org.molgenis.security.core

Update an Authentication with new authorities.

AUTHORITY_ANONYMOUS - Static variable in class org.molgenis.security.core.utils.SecurityUtils

AUTHORITY_SU - Static variable in class org.molgenis.security.core.utils.SecurityUtils

AUTHORITY_USER - Static variable in class org.molgenis.security.core.utils.SecurityUtils

B

build() - Method in class org.molgenis.security.core.model.GroupValue.Builder

build() - Method in class org.molgenis.security.core.model.PackageValue.Builder

build() - Method in class org.molgenis.security.core.model.RoleValue.Builder

build() - Method in class org.molgenis.security.core.SecurityContextUpdateAction.Builder

builder() - Static method in class org.molgenis.security.core.model.GroupValue

builder() - Static method in class org.molgenis.security.core.model.PackageValue

builder() - Static method in class org.molgenis.security.core.model.RoleValue

builder() - Static method in class org.molgenis.security.core.SecurityContextUpdateAction

Builder() - Constructor for class org.molgenis.security.core.model.GroupValue.Builder

Builder() - Constructor for class org.molgenis.security.core.model.PackageValue.Builder

Builder() - Constructor for class org.molgenis.security.core.model.RoleValue.Builder

Builder() - Constructor for class org.molgenis.security.core.SecurityContextUpdateAction.Builder

C

clearCache() - Method in interface org.molgenis.security.acl.MutableAclClassService

COUNT - Static variable in class org.molgenis.security.core.PermissionSet

COUNT_MASK - Static variable in class org.molgenis.security.core.PermissionSet

create(String, String, SecurityContextUpdateAction.Type) - Static method in class org.molgenis.security.core.SecurityContextUpdateAction

createAclClass(String, Class<?>) - Method in interface org.molgenis.security.acl.MutableAclClassService

Creates an ACL class for the given type.

createAnonymousSid() - Static method in class org.molgenis.security.core.SidUtils

createAuthoritySid(String) - Static method in class org.molgenis.security.core.SidUtils

createGroup(String, String, String, boolean, Collection<String>, String) - Method in class org.molgenis.security.core.GroupValueFactory

createGroup(String, String, Collection<String>, String) - Method in class org.molgenis.security.core.GroupValueFactory

createRoleAuthority(String) - Static method in class org.molgenis.security.core.SidUtils

createRoleName(String, String) - Static method in class org.molgenis.security.core.GroupValueFactory

createRoleSid(String) - Static method in class org.molgenis.security.core.SidUtils

createSecurityContextSid() - Static method in class org.molgenis.security.core.SidUtils

createUserSid(String) - Static method in class org.molgenis.security.core.SidUtils

currentUserHasRole(String...) - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns whether the current user has at least one of the given roles

currentUserIsAnonymous() - Static method in class org.molgenis.security.core.utils.SecurityUtils

currentUserIsAuthenticated() - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns whether the current user is authenticated and not the anonymous user

currentUserIsSu() - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns whether the current user is a super user

currentUserIsSuOrSystem() - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns whether the current user is a superuser or the system user.

currentUserIsSystem() - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns whether the current user is the system user.

D

DELETE - org.molgenis.security.core.SecurityContextUpdateAction.Type

deleteAclClass(String) - Method in interface org.molgenis.security.acl.MutableAclClassService

Deletes an ACL class and associated ACLs and ACEs for the given type.

E

encode(CharSequence) - Method in class org.molgenis.security.core.MolgenisPasswordEncoder

F

findUserByToken(String) - Method in interface org.molgenis.security.core.token.TokenService

Find a user by a security token

G

generateAndStoreToken(String, String) - Method in interface org.molgenis.security.core.token.TokenService

Generates a token and associates it with a user.

getAclClassTypes() - Method in interface org.molgenis.security.acl.AclClassService

Returns all ACL class types.

getCredentials() - Method in class org.molgenis.security.core.runas.SystemSecurityToken

getCurrentUsername() - Static method in class org.molgenis.security.core.utils.SecurityUtils

Returns the username of the current authentication.

getDefaultDescription() - Method in interface org.molgenis.security.core.Permission

getDescription() - Method in class org.molgenis.security.core.model.GroupValue

getDescription() - Method in class org.molgenis.security.core.model.PackageValue

getDescription() - Method in class org.molgenis.security.core.model.RoleValue

getDescription() - Method in interface org.molgenis.security.core.Permission

getInstance() - Static method in class org.molgenis.security.core.runas.SystemSecurityToken

getInstance() - Static method in class org.molgenis.security.core.runas.SystemSecurityToken.SystemPrincipal

getLabel() - Method in class org.molgenis.security.core.model.GroupValue

getLabel() - Method in class org.molgenis.security.core.model.PackageValue

getLabel() - Method in class org.molgenis.security.core.model.RoleValue

getMappedName() - Method in interface org.molgenis.security.core.MappedAuthenticatedPrincipal

Returns the mapped name of the authenticated Principal.

getName() - Method in class org.molgenis.security.core.model.GroupValue

getName() - Method in class org.molgenis.security.core.model.PackageValue

getName() - Method in class org.molgenis.security.core.model.RoleValue

getName() - Method in interface org.molgenis.security.core.Permission

getName() - Method in class org.molgenis.security.core.PermissionSet

getNrOfObjectIdentities(String) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get the total number of object identities in the system for a type

getNrOfObjectIdentities(String, Set<Sid>) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get the total number of object identities in the system for a type for a list of sids

getObjectIdentities(String) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get all the object identities in the system for a type

getObjectIdentities(String, int, int) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get a page of object identities in the system for a type

getObjectIdentities(String, Set<Sid>) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get all the object identities in the system for a type for a list of sids

getObjectIdentities(String, Set<Sid>, int, int) - Method in interface org.molgenis.security.acl.ObjectIdentityService

Get a page of object identities in the system for a type for a list of sids

getPermissions(Permission) - Method in class org.molgenis.security.core.PermissionRegistry

getPermissions(ObjectIdentity, Permission[]) - Method in interface org.molgenis.security.core.UserPermissionEvaluator

getPermissionSets() - Method in class org.molgenis.security.core.PermissionRegistry

getPrincipal() - Method in class org.molgenis.security.core.runas.SystemSecurityToken

getRoleName() - Method in class org.molgenis.security.core.SecurityContextUpdateAction

getRoleName(String) - Static method in class org.molgenis.security.core.SidUtils

getRoles() - Method in class org.molgenis.security.core.model.GroupValue

getRootPackage() - Method in class org.molgenis.security.core.model.GroupValue

getSecurityContext(String) - Method in interface org.molgenis.security.core.SecurityContextRegistry

Returns the security context for the session with the given id.

getSecurityContexts() - Method in interface org.molgenis.security.core.SecurityContextRegistry

Returns a stream of all security contexts

getSecurityContexts(Object) - Method in interface org.molgenis.security.core.PrincipalSecurityContextRegistry

getType() - Method in interface org.molgenis.security.core.Permission

getType() - Method in class org.molgenis.security.core.SecurityContextUpdateAction

getUsername() - Method in class org.molgenis.security.core.SecurityContextUpdateAction

GroupValue - Class in org.molgenis.security.core.model

GroupValue() - Constructor for class org.molgenis.security.core.model.GroupValue

GroupValue.Builder - Class in org.molgenis.security.core.model

GroupValueFactory - Class in org.molgenis.security.core

GroupValueFactory() - Constructor for class org.molgenis.security.core.GroupValueFactory

H

hasAclClass(String) - Method in interface org.molgenis.security.acl.AclClassService

Returns whether an ACL class exists for the given type.

hasPermission(ObjectIdentity, List<Permission>) - Method in interface org.molgenis.security.core.UserPermissionEvaluator

Returns whether the currently authenticated user has a given Permission on the given domain object.

hasPermission(ObjectIdentity, Permission) - Method in interface org.molgenis.security.core.UserPermissionEvaluator

Returns whether the currently authenticated user has a given Permission on the given domain object.

I

isAuthenticated() - Method in class org.molgenis.security.core.runas.SystemSecurityToken

isPublic() - Method in class org.molgenis.security.core.model.GroupValue

M

MappedAuthenticatedPrincipal - Interface in org.molgenis.security.core

Representation of an authenticated Principal that exposes a mapping of the name to another name.

matches(CharSequence, String) - Method in class org.molgenis.security.core.MolgenisPasswordEncoder

MolgenisPasswordEncoder - Class in org.molgenis.security.core

MolgenisPasswordEncoder(BCryptPasswordEncoder) - Constructor for class org.molgenis.security.core.MolgenisPasswordEncoder

MutableAclClassService - Interface in org.molgenis.security.acl

Provides support for creating and deleting Acl classes.

N

name() - Method in interface org.molgenis.security.core.Permission

name() - Method in class org.molgenis.security.core.PermissionSet

O

ObjectIdentityService - Interface in org.molgenis.security.acl

Service to retrieve lists of ObjectIdentity in the system in the system.

org.molgenis.security.acl - package org.molgenis.security.acl

org.molgenis.security.core - package org.molgenis.security.core

org.molgenis.security.core.model - package org.molgenis.security.core.model

org.molgenis.security.core.runas - package org.molgenis.security.core.runas

org.molgenis.security.core.token - package org.molgenis.security.core.token

org.molgenis.security.core.utils - package org.molgenis.security.core.utils

P

PackageValue - Class in org.molgenis.security.core.model

PackageValue() - Constructor for class org.molgenis.security.core.model.PackageValue

PackageValue.Builder - Class in org.molgenis.security.core.model

Permission - Interface in org.molgenis.security.core

Permission to perform a specific action on a resource type.

PermissionRegistry - Class in org.molgenis.security.core

PermissionRegistry() - Constructor for class org.molgenis.security.core.PermissionRegistry

PermissionSet - Class in org.molgenis.security.core

Predefined set of permissions to grant in an ACE.

PermissionSet(String, int, char) - Constructor for class org.molgenis.security.core.PermissionSet

PrincipalSecurityContextRegistry - Interface in org.molgenis.security.core

R

READ - Static variable in class org.molgenis.security.core.PermissionSet

READ_MASK - Static variable in class org.molgenis.security.core.PermissionSet

READ_META_MASK - Static variable in class org.molgenis.security.core.PermissionSet

READMETA - Static variable in class org.molgenis.security.core.PermissionSet

removeToken(String) - Method in interface org.molgenis.security.core.token.TokenService

Remove a token from the store

ROLE_ACL_GENERAL_CHANGES - Static variable in class org.molgenis.security.core.utils.SecurityUtils

ROLE_ACL_MODIFY_AUDITING - Static variable in class org.molgenis.security.core.utils.SecurityUtils

ROLE_ACL_TAKE_OWNERSHIP - Static variable in class org.molgenis.security.core.utils.SecurityUtils

ROLE_PREFIX - Static variable in class org.molgenis.security.core.SidUtils

ROLE_SYSTEM - Static variable in class org.molgenis.security.core.utils.SecurityUtils

rolesBuilder() - Method in class org.molgenis.security.core.model.GroupValue.Builder

RoleValue - Class in org.molgenis.security.core.model

RoleValue() - Constructor for class org.molgenis.security.core.model.RoleValue

RoleValue.Builder - Class in org.molgenis.security.core.model

run() - Method in interface org.molgenis.security.core.runas.RunnableAsSystem

runAsSystem(Runnable) - Static method in class org.molgenis.security.core.runas.RunAsSystemAspect

runAsSystem(RunnableAsSystem<T, X>) - Static method in class org.molgenis.security.core.runas.RunAsSystemAspect

RunAsSystem - Annotation Type in org.molgenis.security.core.runas

If a method is annotated with this annotation it is run with role 'ROLE_SYSTEM'

RunAsSystemAspect - Class in org.molgenis.security.core.runas

Proxy that set a SystemSecurityToken in the security context for the duration of a method

RunAsSystemAspect() - Constructor for class org.molgenis.security.core.runas.RunAsSystemAspect

RunnableAsSystem<T,X extends Throwable> - Interface in org.molgenis.security.core.runas

S

SecurityContextRegistry - Interface in org.molgenis.security.core

SecurityContextUpdateAction - Class in org.molgenis.security.core

SecurityContextUpdateAction() - Constructor for class org.molgenis.security.core.SecurityContextUpdateAction

SecurityContextUpdateAction.Builder - Class in org.molgenis.security.core

SecurityContextUpdateAction.Type - Enum in org.molgenis.security.core

SecurityUtils - Class in org.molgenis.security.core.utils

setDescription(String) - Method in class org.molgenis.security.core.model.GroupValue.Builder

setDescription(String) - Method in class org.molgenis.security.core.model.PackageValue.Builder

setDescription(String) - Method in class org.molgenis.security.core.model.RoleValue.Builder

setLabel(String) - Method in class org.molgenis.security.core.model.GroupValue.Builder

setLabel(String) - Method in class org.molgenis.security.core.model.PackageValue.Builder

setLabel(String) - Method in class org.molgenis.security.core.model.RoleValue.Builder

setName(String) - Method in class org.molgenis.security.core.model.GroupValue.Builder

setName(String) - Method in class org.molgenis.security.core.model.PackageValue.Builder

setName(String) - Method in class org.molgenis.security.core.model.RoleValue.Builder

setPublic(boolean) - Method in class org.molgenis.security.core.model.GroupValue.Builder

setRoleName(String) - Method in class org.molgenis.security.core.SecurityContextUpdateAction.Builder

setRootPackage(PackageValue) - Method in class org.molgenis.security.core.model.GroupValue.Builder

setType(SecurityContextUpdateAction.Type) - Method in class org.molgenis.security.core.SecurityContextUpdateAction.Builder

setUsername(String) - Method in class org.molgenis.security.core.SecurityContextUpdateAction.Builder

SidUtils - Class in org.molgenis.security.core

Util class to create security identities for users and roles.

SystemSecurityToken - Class in org.molgenis.security.core.runas

Authentication token for the SYSTEM user

SystemSecurityToken.SystemPrincipal - Class in org.molgenis.security.core.runas

T

TokenService - Interface in org.molgenis.security.core.token

Store and remove molgenis security tokens

U

UnknownTokenException - Exception in org.molgenis.security.core.token

Exception thrown when an invalid token is encountered

UnknownTokenException(String) - Constructor for exception org.molgenis.security.core.token.UnknownTokenException

UnknownTokenException(String, Throwable) - Constructor for exception org.molgenis.security.core.token.UnknownTokenException

updateAuthentication(Authentication, List<GrantedAuthority>) - Method in interface org.molgenis.security.core.AuthenticationAuthoritiesUpdater

Update an Authentication with new authorities.

UserPermissionEvaluator - Interface in org.molgenis.security.core

Evaluates permissions for the currently authenticated user.

V

valueOf(String) - Static method in enum org.molgenis.security.core.SecurityContextUpdateAction.Type

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.molgenis.security.core.SecurityContextUpdateAction.Type

Returns an array containing the constants of this enum type, in the order they are declared.

W

WRITE - Static variable in class org.molgenis.security.core.PermissionSet

WRITE_MASK - Static variable in class org.molgenis.security.core.PermissionSet

WRITEMETA - Static variable in class org.molgenis.security.core.PermissionSet

WRITEMETA_MASK - Static variable in class org.molgenis.security.core.PermissionSet

A B C D E F G H I M N O P R S T U V W
All Classes All Packages