Index (security 7.4.8 API)

A B C D E F G H I L M N O P R S T U V W

A

AccountController - Class in org.molgenis.security.account
AccountController(AccountService, ReCaptchaService, RedirectStrategy, AuthenticationSettings, UserFactory, AppSettings) - Constructor for class org.molgenis.security.account.AccountController
AccountService - Interface in org.molgenis.security.account
AccountServiceImpl - Class in org.molgenis.security.account
aclAuthorizationStrategy() - Method in class org.springframework.security.acls.jdbc.AclConfig
aclCache() - Method in class org.springframework.security.acls.jdbc.AclConfig
AclCacheTransactionListener - Class in org.molgenis.security.acl
AclCacheTransactionListener(AclCache, MutableAclClassService) - Constructor for class org.molgenis.security.acl.AclCacheTransactionListener
aclCacheTransactionListener() - Method in class org.springframework.security.acls.jdbc.AclConfig
aclClassIdUtils() - Method in class org.springframework.security.acls.jdbc.AclConfig
AclConfig - Class in org.springframework.security.acls.jdbc: TODO move to org.molgenis sub-package once we upgraded to a spring-security-acl release with https://github.com/spring-projects/spring-security/issues/4814.
AclConfig(DataSource, TransactionManager) - Constructor for class org.springframework.security.acls.jdbc.AclConfig
aclPermissionEvaluator() - Method in class org.springframework.security.acls.jdbc.AclConfig
aclService() - Method in class org.springframework.security.acls.jdbc.AclConfig
activateUser(String, Model) - Method in class org.molgenis.security.account.AccountController
activateUser(String) - Method in interface org.molgenis.security.account.AccountService: Activate a registered user
activateUser(String) - Method in class org.molgenis.security.account.AccountServiceImpl
activation(Model) - Method in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
addGroupMember(String, String) - Static method in class org.molgenis.security.group.AddGroupMemberCommand
AddGroupMemberCommand - Class in org.molgenis.security.group
AddGroupMemberCommand() - Constructor for class org.molgenis.security.group.AddGroupMemberCommand
addMember(String, AddGroupMemberCommand) - Method in class org.molgenis.security.group.GroupRestController
AjaxAwareInvalidSessionStrategy - Class in org.molgenis.security: Same as SimpleRedirectInvalidSessionStrategy except for XMLHttpRequests in which case a status code is returned instead of redirection.
AjaxAwareLoginUrlAuthenticationEntryPoint - Class in org.molgenis.security
anonymousAuthenticationProvider() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
anonymousAuthFilter() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
ATTRIBUTE_2FA_SECRET_KEY - Static variable in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
auditLogger() - Method in class org.springframework.security.acls.jdbc.AclConfig
authenticate(Authentication) - Method in class org.molgenis.security.token.TokenAuthenticationProvider
authenticate(Authentication) - Method in class org.molgenis.security.twofactor.auth.RecoveryAuthenticationProviderImpl
authenticate(Authentication) - Method in class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationProviderImpl
authenticate(Model, String, String) - Method in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
AuthenticationAuthoritiesUpdater - Interface in org.molgenis.security.permission: Update an Authentication with new authorities.
AuthenticationAuthoritiesUpdaterImpl - Class in org.molgenis.security.permission
AuthenticationAuthoritiesUpdaterImpl() - Constructor for class org.molgenis.security.permission.AuthenticationAuthoritiesUpdaterImpl
authenticationEntryPoint() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
authenticationManagerBean() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
AuthenticationSettings - Interface in org.molgenis.security.settings
AuthenticationSettingsImpl - Class in org.molgenis.security.settings
AuthenticationSettingsImpl() - Constructor for class org.molgenis.security.settings.AuthenticationSettingsImpl
AuthenticationSettingsImpl.Meta - Class in org.molgenis.security.settings
authorizedClientService() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig

B

bindToRegistry() - Method in class org.molgenis.security.metrics.SessionMetrics
BitMaskPermissionGrantingStrategy - Class in org.molgenis.security.acl: Permission granting strategy similar to DefaultPermissionGrantingStrategy but uses a bitwise 'and' to compare permission masks.
BitMaskPermissionGrantingStrategy(AuditLogger) - Constructor for class org.molgenis.security.acl.BitMaskPermissionGrantingStrategy

C

CaptchaException - Exception in org.molgenis.security.captcha: Deprecated.
use class that extends from CodedRuntimeException
CaptchaException(String) - Constructor for exception org.molgenis.security.captcha.CaptchaException: Deprecated.
CHANGE_PASSWORD_URI - Static variable in class org.molgenis.security.account.AccountController
changePassword(ChangePasswordForm, HttpServletRequest, HttpServletResponse) - Method in class org.molgenis.security.account.AccountController
changePassword(String, String) - Method in interface org.molgenis.security.account.AccountService
changePassword(String, String) - Method in class org.molgenis.security.account.AccountServiceImpl
changePasswordFilter() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
ChangePasswordForm - Class in org.molgenis.security.account
ChangePasswordForm() - Constructor for class org.molgenis.security.account.ChangePasswordForm
check(UserDetails) - Method in class org.molgenis.security.user.MolgenisUserDetailsChecker
clearCache() - Method in class org.molgenis.security.acl.MutableAclClassServiceImpl
clientRegistrationRepository() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
CODE - Static variable in class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
commence(HttpServletRequest, HttpServletResponse, AuthenticationException) - Method in class org.molgenis.security.AjaxAwareLoginUrlAuthenticationEntryPoint
configure(HttpSecurity) - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
configure(WebSecurity) - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
configure(AuthenticationManagerBuilder) - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
configured() - Method in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
configureUrlAuthorization(ExpressionUrlAuthorizationConfigurer<HttpSecurity>.ExpressionInterceptUrlRegistry) - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
create(Set<String>, Multimap<String, String>) - Static method in class org.molgenis.security.permission.Permissions
create(String, UserDetails, Class<? extends Authentication>) - Method in class org.molgenis.security.token.RunAsUserTokenFactory
createAcl(ObjectIdentity) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService: Same as JdbcMutableAclService.createAcl(ObjectIdentity) except for duplicate key checking which is handled by by the database for performance reasons.
createAclClass(String, Class<?>) - Method in class org.molgenis.security.acl.MutableAclClassServiceImpl
createDecoratedRepository(Repository<OidcClient>) - Method in class org.molgenis.security.oidc.model.OidcClientRepositoryDecoratorFactory
createGroup(GroupCommand) - Method in class org.molgenis.security.group.GroupRestController
createUser(User, String) - Method in interface org.molgenis.security.account.AccountService
createUser(User, String) - Method in class org.molgenis.security.account.AccountServiceImpl

D

DataServiceClientRegistrationRepository - Class in org.molgenis.security.oidc
DataServiceClientRegistrationRepository(AuthenticationSettings) - Constructor for class org.molgenis.security.oidc.DataServiceClientRegistrationRepository
DataServiceTokenService - Class in org.molgenis.security.token: TokensService implementation that uses the DataService
DataServiceTokenService(TokenGenerator, DataService, UserDetailsService, TokenFactory) - Constructor for class org.molgenis.security.token.DataServiceTokenService
DataSourceAclTablesPopulator - Class in org.molgenis.security.acl
DataSourceAclTablesPopulator(DataSource) - Constructor for class org.molgenis.security.acl.DataSourceAclTablesPopulator
deleteAcl(ObjectIdentity, boolean) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
deleteAclClass(String) - Method in class org.molgenis.security.acl.MutableAclClassServiceImpl
deleteGroup(String) - Method in class org.molgenis.security.group.GroupRestController
disableForUser() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService: Disable 2 factor authentication for the current user
disableForUser() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
doFilter(ServletRequest, ServletResponse, FilterChain) - Method in class org.molgenis.security.MolgenisChangePasswordFilter
doFilter(ServletRequest, ServletResponse, FilterChain) - Method in class org.molgenis.security.token.TokenAuthenticationFilter
doFilterInternal(HttpServletRequest, HttpServletResponse, FilterChain) - Method in class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationFilter

E

EmailAlreadyExistsException - Exception in org.molgenis.security.account: Deprecated.
use class that extends from CodedRuntimeException
EmailAlreadyExistsException() - Constructor for exception org.molgenis.security.account.EmailAlreadyExistsException: Deprecated.
EmailAlreadyExistsException(String) - Constructor for exception org.molgenis.security.account.EmailAlreadyExistsException: Deprecated.
EmailAlreadyExistsException(Throwable) - Constructor for exception org.molgenis.security.account.EmailAlreadyExistsException: Deprecated.
EmailAlreadyExistsException(String, Throwable) - Constructor for exception org.molgenis.security.account.EmailAlreadyExistsException: Deprecated.
EmailAlreadyExistsException(String, Throwable, boolean, boolean) - Constructor for exception org.molgenis.security.account.EmailAlreadyExistsException: Deprecated.
enableForUser() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService
enableForUser() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
equals(Object) - Method in class org.molgenis.security.captcha.ReCaptchaValidationRequest
equals(Object) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
equals(Object) - Method in class org.molgenis.security.permission.Permission
equals(Object) - Method in class org.molgenis.security.twofactor.auth.RecoveryAuthenticationToken
ERROR_MESSAGE_ATTRIBUTE - Static variable in class org.molgenis.security.login.MolgenisLoginController
ERROR_MESSAGE_DISABLED - Static variable in class org.molgenis.security.login.MolgenisLoginController
execute(boolean, Environment, TemplateDirectiveBody) - Method in class org.molgenis.security.freemarker.HasPermissionDirective
execute(boolean, Environment, TemplateDirectiveBody) - Method in class org.molgenis.security.freemarker.NotHasPermissionDirective
execute(Environment, Map, TemplateModel[], TemplateDirectiveBody) - Method in class org.molgenis.security.freemarker.PermissionDirective
execute(boolean, Environment, TemplateDirectiveBody) - Method in class org.molgenis.security.freemarker.PermissionDirective

F

FAILED_LOGIN_ATTEMPTS - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
findByRegistrationId(String) - Method in class org.molgenis.security.oidc.DataServiceClientRegistrationRepository
findChildren(ObjectIdentity) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
findUserByToken(String) - Method in class org.molgenis.security.token.DataServiceTokenService: Find a user by a security token
fromLabel(String) - Static method in enum org.molgenis.security.twofactor.auth.TwoFactorAuthenticationSetting

G

generateAndStoreToken(String, String) - Method in class org.molgenis.security.token.DataServiceTokenService: Generates a token and associates it with a user.
generateRecoveryCodes() - Method in interface org.molgenis.security.twofactor.service.RecoveryService: Generates new recovery codes for the current user and deletes the old codes (if any).
generateRecoveryCodes() - Method in class org.molgenis.security.twofactor.service.RecoveryServiceImpl
generateSecretKey() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService
generateSecretKey() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
generateToken() - Method in class org.molgenis.security.token.TokenGenerator
getAclClassTypes() - Method in class org.molgenis.security.acl.MutableAclClassServiceImpl
getAction() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getAuthenticatorURI(String) - Method in interface org.molgenis.security.twofactor.service.OtpService: Generate URI for use in authenticator apps
getAuthenticatorURI(String) - Method in class org.molgenis.security.twofactor.service.OtpServiceImpl
getAuthorities(User) - Method in class org.molgenis.security.user.UserDetailsService
getAuthorizationGrantType() - Method in class org.molgenis.security.oidc.model.OidcClient
getAuthorizationUri() - Method in class org.molgenis.security.oidc.model.OidcClient
getChallenge_ts() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getChangePasswordForm() - Method in class org.molgenis.security.account.AccountController
getClientAuthenticationMethod() - Method in class org.molgenis.security.oidc.model.OidcClient
getClientId() - Method in class org.molgenis.security.oidc.model.OidcClient
getClientName() - Method in class org.molgenis.security.oidc.model.OidcClient
getClientSecret() - Method in class org.molgenis.security.oidc.model.OidcClient
getCode() - Method in class org.molgenis.security.twofactor.model.RecoveryCode
getCurrentUser() - Method in interface org.molgenis.security.user.UserAccountService: Returns the currently logged in user
getCurrentUser() - Method in class org.molgenis.security.user.UserAccountServiceImpl
getErrorCodes() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getFailedLoginAttempts() - Method in class org.molgenis.security.twofactor.model.UserSecret
getGroupRoles(String) - Method in class org.molgenis.security.group.GroupRestController
getGroups() - Method in class org.molgenis.security.group.GroupRestController
getHostname() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getId() - Method in class org.molgenis.security.group.UserResponse
getId() - Method in class org.molgenis.security.oidc.model.OidcUserMapping
getId() - Method in class org.molgenis.security.twofactor.model.RecoveryCode
getId() - Method in class org.molgenis.security.twofactor.model.UserSecret
getIds() - Method in class org.molgenis.security.permission.Permissions
getJwkSetUri() - Method in class org.molgenis.security.oidc.model.OidcClient
getLabel() - Method in class org.molgenis.security.group.GroupCommand
getLabel() - Method in class org.molgenis.security.group.GroupResponse
getLabel() - Method in class org.molgenis.security.oidc.model.OidcUserMapping
getLabel() - Method in enum org.molgenis.security.twofactor.auth.TwoFactorAuthenticationSetting
getLastFailedAuthentication() - Method in class org.molgenis.security.twofactor.model.UserSecret
getLoginErrorPage(Model) - Method in class org.molgenis.security.login.MolgenisLoginController
getLoginErrorPage(Model, HttpServletRequest) - Method in class org.molgenis.security.login.MolgenisLoginController
getLoginForm() - Method in class org.molgenis.security.account.AccountController
getLoginPage() - Method in class org.molgenis.security.login.MolgenisLoginController
getMappedName() - Method in class org.molgenis.security.oidc.MappedOidcUser
getMembers(String) - Method in class org.molgenis.security.group.GroupRestController
getName() - Method in class org.molgenis.security.group.GroupCommand
getName() - Method in class org.molgenis.security.group.GroupResponse
getOidcClient() - Method in class org.molgenis.security.oidc.model.OidcUserMapping
getOidcClients() - Method in interface org.molgenis.security.settings.AuthenticationSettings
getOidcClients() - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
getOidcUsername() - Method in class org.molgenis.security.oidc.model.OidcUserMapping
getPassword1() - Method in class org.molgenis.security.account.ChangePasswordForm
getPassword2() - Method in class org.molgenis.security.account.ChangePasswordForm
getPasswordResetForm() - Method in class org.molgenis.security.account.AccountController
getPermissions(String) - Method in class org.molgenis.security.group.GroupRestController
getPermissions() - Method in class org.molgenis.security.permission.Permissions
getPermissions(ObjectIdentity, Permission[]) - Method in class org.molgenis.security.permission.UserPermissionEvaluatorImpl
getRecoveryCode() - Method in class org.molgenis.security.twofactor.auth.RecoveryAuthenticationToken
getRecoveryCodes() - Method in interface org.molgenis.security.twofactor.service.RecoveryService: Get the recovery codes (if any) of the current user.
getRecoveryCodes() - Method in class org.molgenis.security.twofactor.service.RecoveryServiceImpl
getRegisterForm() - Method in class org.molgenis.security.account.AccountController
getRegistrationId() - Method in class org.molgenis.security.oidc.model.OidcClient
getRole() - Method in class org.molgenis.security.group.GroupMemberResponse
getRole() - Method in class org.molgenis.security.permission.Permission
getRoleLabel() - Method in class org.molgenis.security.group.RoleResponse
getRoleName() - Method in class org.molgenis.security.group.AddGroupMemberCommand
getRoleName() - Method in class org.molgenis.security.group.RoleResponse
getRoleName() - Method in class org.molgenis.security.group.UpdateGroupMemberCommand
getScopes() - Method in class org.molgenis.security.oidc.model.OidcClient
getScore() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getSecret() - Method in class org.molgenis.security.twofactor.model.UserSecret
getSecretKey() - Method in class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationToken
getSecurityContext(String) - Method in interface org.molgenis.security.permission.SecurityContextRegistry: Returns the security context for the session with the given id.
getSecurityContext(String) - Method in class org.molgenis.security.permission.SecurityContextRegistryImpl
getSecurityContexts(Object) - Method in interface org.molgenis.security.permission.PrincipalSecurityContextRegistry
getSecurityContexts(Object) - Method in class org.molgenis.security.permission.PrincipalSecurityContextRegistryImpl
getSecurityContexts() - Method in interface org.molgenis.security.permission.SecurityContextRegistry: Returns a stream of all security contexts
getSecurityContexts() - Method in class org.molgenis.security.permission.SecurityContextRegistryImpl
getSignUp() - Method in interface org.molgenis.security.settings.AuthenticationSettings
getSignUp() - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
getSignUpModeration() - Method in interface org.molgenis.security.settings.AuthenticationSettings
getSignUpModeration() - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
getString() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
getToken() - Method in class org.molgenis.security.captcha.ReCaptchaValidationRequest
getToken() - Method in class org.molgenis.security.token.RestAuthenticationToken
getToken(HttpServletRequest) - Static method in class org.molgenis.security.token.TokenExtractor
getTokenUri() - Method in class org.molgenis.security.oidc.model.OidcClient
getTwoFactorAuthentication() - Method in interface org.molgenis.security.settings.AuthenticationSettings
getTwoFactorAuthentication() - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
getType() - Method in class org.molgenis.security.permission.Permission
getUser() - Method in class org.molgenis.security.group.GroupMemberResponse
getUser() - Method in class org.molgenis.security.oidc.model.OidcUserMapping
getUserId() - Method in class org.molgenis.security.twofactor.model.RecoveryCode
getUserId() - Method in class org.molgenis.security.twofactor.model.UserSecret
getUserInfoUri() - Method in class org.molgenis.security.oidc.model.OidcClient
getUsername() - Method in class org.molgenis.security.group.AddGroupMemberCommand
getUsername() - Method in class org.molgenis.security.group.UserResponse
getUsernameAttributeName() - Method in class org.molgenis.security.oidc.model.OidcClient
getUsers() - Method in class org.molgenis.security.group.GroupRestController
getVerificationCode() - Method in class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationToken
giveUserWriteMetaPermissions(EntityType) - Method in class org.molgenis.security.permission.PermissionSystemServiceImpl: Deprecated.
giveUserWriteMetaPermissions(Collection<EntityType>) - Method in class org.molgenis.security.permission.PermissionSystemServiceImpl: Deprecated.
GroupCommand - Class in org.molgenis.security.group
GroupCommand() - Constructor for class org.molgenis.security.group.GroupCommand
GroupMemberResponse - Class in org.molgenis.security.group
GroupMemberResponse() - Constructor for class org.molgenis.security.group.GroupMemberResponse
GroupResponse - Class in org.molgenis.security.group
GroupResponse() - Constructor for class org.molgenis.security.group.GroupResponse
GroupRestController - Class in org.molgenis.security.group

H

handleEmailAlreadyExistsException(EmailAlreadyExistsException) - Method in class org.molgenis.security.account.AccountController
handleHttpSessionCreatedEvent(HttpSessionCreatedEvent) - Method in class org.molgenis.security.permission.SecurityContextRegistryImpl
handleHttpSessionDestroyedEvent(HttpSessionDestroyedEvent) - Method in class org.molgenis.security.permission.SecurityContextRegistryImpl
handleMolgenisDataException(MolgenisDataException) - Method in class org.molgenis.security.account.AccountController
handleMolgenisUserException(MolgenisUserException) - Method in class org.molgenis.security.account.AccountController
handleRuntimeException(RuntimeException) - Method in class org.molgenis.security.account.AccountController
handleUsernameAlreadyExistsException(UsernameAlreadyExistsException) - Method in class org.molgenis.security.account.AccountController
hasAclClass(String) - Method in class org.molgenis.security.acl.MutableAclClassServiceImpl
hashCode() - Method in class org.molgenis.security.captcha.ReCaptchaValidationRequest
hashCode() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
hashCode() - Method in class org.molgenis.security.permission.Permission
hashCode() - Method in class org.molgenis.security.twofactor.auth.RecoveryAuthenticationToken
hasPermission(ObjectIdentity, Permission) - Method in class org.molgenis.security.permission.UserPermissionEvaluatorImpl
hasPermission(ObjectIdentity, List<Permission>) - Method in class org.molgenis.security.permission.UserPermissionEvaluatorImpl
HasPermissionDirective - Class in org.molgenis.security.freemarker: Directive that prints the body of the tag if the current user has Permission on entity
HasPermissionDirective(UserPermissionEvaluator) - Constructor for class org.molgenis.security.freemarker.HasPermissionDirective
hasReadPermission(String) - Method in class org.molgenis.security.permission.MolgenisPermissionController
hasWritePermission(String) - Method in class org.molgenis.security.permission.MolgenisPermissionController
httpSessionEventPublisher() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig

I

ID - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
ID - Static variable in class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
ID - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
init() - Method in class org.molgenis.security.oidc.model.OidcClientMetadata
init() - Method in class org.molgenis.security.oidc.model.OidcPackage
init() - Method in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
init() - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl.Meta
init() - Method in class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
init() - Method in class org.molgenis.security.twofactor.model.UserSecretMetaData
invalidSessionStrategy() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
InvalidVerificationCodeException - Exception in org.molgenis.security.twofactor.exceptions: This exception is used to determine in the TwoFactorAuthenticationController what message should be thrown
InvalidVerificationCodeException(String) - Constructor for exception org.molgenis.security.twofactor.exceptions.InvalidVerificationCodeException
isConfiguredForUser() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService: Check if the user is 2 factor authentication ready.
isConfiguredForUser() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
isGranted(Acl, List<Permission>, List<Sid>, boolean) - Method in class org.molgenis.security.acl.BitMaskPermissionGrantingStrategy
isSuccess() - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
isVerificationCodeValidForUser(String) - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService: Check verificationcode given by user from Google Authenticator
isVerificationCodeValidForUser(String) - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl

L

LABEL - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
LAST_FAILED_AUTHENICATION - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
loadAuthorizedClient(String, String) - Method in class org.molgenis.security.oidc.ResettableOAuth2AuthorizedClientService: Copy of InMemoryOAuth2AuthorizedClientService.loadAuthorizedClient(String, String)
loadUser(OidcUserRequest) - Method in class org.molgenis.security.oidc.MappedOidcUserService
loadUserByUsername(String) - Method in class org.molgenis.security.user.UserDetailsService
localeResolver() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
logIfNeeded(boolean, AccessControlEntry) - Method in class org.molgenis.security.NoOpAuditLogger
lookupStrategy() - Method in class org.springframework.security.acls.jdbc.AclConfig

M

MappedOidcUser - Class in org.molgenis.security.oidc: DefaultOidcUser with a mapped username.
MappedOidcUserService - Class in org.molgenis.security.oidc
MappedOidcUserService(OidcUserMapper, UserDetailsService) - Constructor for class org.molgenis.security.oidc.MappedOidcUserService
messages - Variable in class org.molgenis.security.user.MolgenisUserDetailsChecker
Meta(OidcClientMetadata) - Constructor for class org.molgenis.security.settings.AuthenticationSettingsImpl.Meta
MIN_PASSWORD_LENGTH - Static variable in interface org.molgenis.security.user.UserAccountService
MolgenisChangePasswordFilter - Class in org.molgenis.security
MolgenisChangePasswordFilter(UserService, RedirectStrategy) - Constructor for class org.molgenis.security.MolgenisChangePasswordFilter
MolgenisLoginController - Class in org.molgenis.security.login
MolgenisLoginController() - Constructor for class org.molgenis.security.login.MolgenisLoginController
MolgenisPermissionController - Class in org.molgenis.security.permission
MolgenisPermissionController(UserPermissionEvaluator) - Constructor for class org.molgenis.security.permission.MolgenisPermissionController
MolgenisUserDetailsChecker - Class in org.molgenis.security.user: Checks user details during the authentication process
MolgenisUserDetailsChecker() - Constructor for class org.molgenis.security.user.MolgenisUserDetailsChecker
MolgenisUserException - Exception in org.molgenis.security.user: Deprecated.
use class that extends from org.molgenis.i18n.CodedRuntimeException
MolgenisUserException(String) - Constructor for exception org.molgenis.security.user.MolgenisUserException: Deprecated.
MolgenisUserException(Exception) - Constructor for exception org.molgenis.security.user.MolgenisUserException: Deprecated.
MolgenisWebAppSecurityConfig - Class in org.molgenis.security
MolgenisWebAppSecurityConfig() - Constructor for class org.molgenis.security.MolgenisWebAppSecurityConfig
mutableAclClassService() - Method in class org.springframework.security.acls.jdbc.AclConfig
MutableAclClassServiceImpl - Class in org.molgenis.security.acl
MutableAclClassServiceImpl(JdbcTemplate, AclCache) - Constructor for class org.molgenis.security.acl.MutableAclClassServiceImpl

N

NoOpAuditLogger - Class in org.molgenis.security: A no operation AuditLogger suitable for disabling audit logging.
NoOpAuditLogger() - Constructor for class org.molgenis.security.NoOpAuditLogger
NotHasPermissionDirective - Class in org.molgenis.security.freemarker: Directive that prints the body of the tag if the current user has no permission on entity
NotHasPermissionDirective(UserPermissionEvaluator) - Constructor for class org.molgenis.security.freemarker.NotHasPermissionDirective

O

OIDC_CLIENT - Static variable in class org.molgenis.security.oidc.model.OidcClientMetadata
OIDC_CLIENT - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
OIDC_USER_MAPPING - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
OIDC_USERNAME - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
OidcClient - Class in org.molgenis.security.oidc.model: A representation of a client registration with an OpenID Connect 1.0 Provider.
OidcClient(Entity) - Constructor for class org.molgenis.security.oidc.model.OidcClient
OidcClient(EntityType) - Constructor for class org.molgenis.security.oidc.model.OidcClient
OidcClient(String, EntityType) - Constructor for class org.molgenis.security.oidc.model.OidcClient
OidcClientFactory - Class in org.molgenis.security.oidc.model
OidcClientMetadata - Class in org.molgenis.security.oidc.model
OidcClientMetadata(OidcPackage) - Constructor for class org.molgenis.security.oidc.model.OidcClientMetadata
OidcClientRepositoryDecoratorFactory - Class in org.molgenis.security.oidc.model
OidcClientRepositoryDecoratorFactory(OidcClientMetadata, ResettableOAuth2AuthorizedClientService) - Constructor for class org.molgenis.security.oidc.model.OidcClientRepositoryDecoratorFactory
OidcPackage - Class in org.molgenis.security.oidc.model
OidcPackage(PackageMetadata, SecurityPackage) - Constructor for class org.molgenis.security.oidc.model.OidcPackage
oidcUserMapper() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
OidcUserMapper - Interface in org.molgenis.security.oidc
OidcUserMapperImpl - Class in org.molgenis.security.oidc
OidcUserMapperImpl(DataService, OidcUserMappingFactory, UserFactory) - Constructor for class org.molgenis.security.oidc.OidcUserMapperImpl
OidcUserMapping - Class in org.molgenis.security.oidc.model
OidcUserMapping(Entity) - Constructor for class org.molgenis.security.oidc.model.OidcUserMapping
OidcUserMapping(EntityType) - Constructor for class org.molgenis.security.oidc.model.OidcUserMapping
OidcUserMapping(String, EntityType) - Constructor for class org.molgenis.security.oidc.model.OidcUserMapping
OidcUserMappingFactory - Class in org.molgenis.security.oidc.model
OidcUserMappingMetadata - Class in org.molgenis.security.oidc.model
OidcUserMappingMetadata(OidcPackage, OidcClientMetadata, UserMetaData) - Constructor for class org.molgenis.security.oidc.model.OidcUserMappingMetadata
oidcUserService() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
onInvalidSessionDetected(HttpServletRequest, HttpServletResponse) - Method in class org.molgenis.security.AjaxAwareInvalidSessionStrategy
org.molgenis.security - package org.molgenis.security
org.molgenis.security.account - package org.molgenis.security.account
org.molgenis.security.acl - package org.molgenis.security.acl
org.molgenis.security.captcha - package org.molgenis.security.captcha
org.molgenis.security.freemarker - package org.molgenis.security.freemarker
org.molgenis.security.group - package org.molgenis.security.group
org.molgenis.security.login - package org.molgenis.security.login
org.molgenis.security.metrics - package org.molgenis.security.metrics
org.molgenis.security.oidc - package org.molgenis.security.oidc
org.molgenis.security.oidc.model - package org.molgenis.security.oidc.model
org.molgenis.security.permission - package org.molgenis.security.permission
org.molgenis.security.settings - package org.molgenis.security.settings
org.molgenis.security.token - package org.molgenis.security.token
org.molgenis.security.twofactor - package org.molgenis.security.twofactor
org.molgenis.security.twofactor.auth - package org.molgenis.security.twofactor.auth
org.molgenis.security.twofactor.exceptions - package org.molgenis.security.twofactor.exceptions
org.molgenis.security.twofactor.model - package org.molgenis.security.twofactor.model
org.molgenis.security.twofactor.service - package org.molgenis.security.twofactor.service
org.molgenis.security.user - package org.molgenis.security.user
org.springframework.security.acls.jdbc - package org.springframework.security.acls.jdbc
OtpService - Interface in org.molgenis.security.twofactor.service: OTPService is used to determine if the UserSecret matches the given validationcode.
OtpServiceImpl - Class in org.molgenis.security.twofactor.service
OtpServiceImpl(AppSettings) - Constructor for class org.molgenis.security.twofactor.service.OtpServiceImpl

P

PARAM_SESSION_EXPIRED - Static variable in class org.molgenis.security.login.MolgenisLoginController
passwordEncoder() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
PATH_SEGMENT_APPS - Static variable in class org.molgenis.security.UriConstants
Permission - Class in org.molgenis.security.permission
Permission() - Constructor for class org.molgenis.security.permission.Permission
PermissionDirective - Class in org.molgenis.security.freemarker
permissionGrantingStrategy() - Method in class org.springframework.security.acls.jdbc.AclConfig
Permissions - Class in org.molgenis.security.permission
Permissions() - Constructor for class org.molgenis.security.permission.Permissions
PermissionSystemServiceImpl - Class in org.molgenis.security.permission: Deprecated.
use MutableAclService
PermissionSystemServiceImpl(MutableAclService) - Constructor for class org.molgenis.security.permission.PermissionSystemServiceImpl: Deprecated.
populate() - Method in class org.molgenis.security.acl.DataSourceAclTablesPopulator
PrincipalSecurityContextRegistry - Interface in org.molgenis.security.permission
PrincipalSecurityContextRegistryImpl - Class in org.molgenis.security.permission

R

readAclById(ObjectIdentity, List<Sid>) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
readAclById(ObjectIdentity) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
readAclsById(List<ObjectIdentity>) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
readAclsById(List<ObjectIdentity>, List<Sid>) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
ReCaptchaController - Class in org.molgenis.security.captcha
ReCaptchaController() - Constructor for class org.molgenis.security.captcha.ReCaptchaController
ReCaptchaHttpPostFactory - Class in org.molgenis.security.captcha
ReCaptchaHttpPostFactory() - Constructor for class org.molgenis.security.captcha.ReCaptchaHttpPostFactory
ReCaptchaService - Class in org.molgenis.security.captcha
ReCaptchaService(CloseableHttpClient, AppSettings, ReCaptchaHttpPostFactory) - Constructor for class org.molgenis.security.captcha.ReCaptchaService
ReCaptchaValidationRequest - Class in org.molgenis.security.captcha
ReCaptchaValidationRequest(String) - Constructor for class org.molgenis.security.captcha.ReCaptchaValidationRequest
ReCaptchaValidationResponse - Class in org.molgenis.security.captcha
ReCaptchaValidationResponse(boolean, double, String, String, String, String, List<String>) - Constructor for class org.molgenis.security.captcha.ReCaptchaValidationResponse
recoverAccount(Model, String) - Method in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
RECOVERY_CODE - Static variable in class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
recoveryAuthenticationProvider() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
RecoveryAuthenticationProvider - Interface in org.molgenis.security.twofactor.auth: Marker interface for RecoveryAuthenticationProvider when you do not implement is this way you get error messages like:
RecoveryAuthenticationProviderImpl - Class in org.molgenis.security.twofactor.auth: AuthenticationProvider that offers the possibility to authenticate users with a recovery code.
RecoveryAuthenticationProviderImpl(RecoveryService) - Constructor for class org.molgenis.security.twofactor.auth.RecoveryAuthenticationProviderImpl
RecoveryAuthenticationToken - Class in org.molgenis.security.twofactor.auth
RecoveryAuthenticationToken(Object, Object, Collection<? extends GrantedAuthority>, String) - Constructor for class org.molgenis.security.twofactor.auth.RecoveryAuthenticationToken
RecoveryAuthenticationToken(String) - Constructor for class org.molgenis.security.twofactor.auth.RecoveryAuthenticationToken
RecoveryCode - Class in org.molgenis.security.twofactor.model
RecoveryCode(Entity) - Constructor for class org.molgenis.security.twofactor.model.RecoveryCode
RecoveryCode(EntityType) - Constructor for class org.molgenis.security.twofactor.model.RecoveryCode
RecoveryCode(String, EntityType) - Constructor for class org.molgenis.security.twofactor.model.RecoveryCode
RecoveryCodeFactory - Class in org.molgenis.security.twofactor.model
RecoveryCodeMetadata - Class in org.molgenis.security.twofactor.model
RecoveryCodeMetadata(SecurityPackage) - Constructor for class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
RecoveryService - Interface in org.molgenis.security.twofactor.service: Service that manages a user's recovery codes.
RecoveryServiceImpl - Class in org.molgenis.security.twofactor.service
RecoveryServiceImpl(DataService, UserService, RecoveryCodeFactory, IdGenerator) - Constructor for class org.molgenis.security.twofactor.service.RecoveryServiceImpl
redirectStrategy() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
registerUser(RegisterRequest, HttpServletRequest) - Method in class org.molgenis.security.account.AccountController
removeAuthorizedClient(String, String) - Method in class org.molgenis.security.oidc.ResettableOAuth2AuthorizedClientService: Copy of InMemoryOAuth2AuthorizedClientService.removeAuthorizedClient(String, String)
removeMember(String, String) - Method in class org.molgenis.security.group.GroupRestController
removeToken(String) - Method in class org.molgenis.security.token.DataServiceTokenService
reset() - Method in class org.molgenis.security.oidc.ResettableOAuth2AuthorizedClientService
resetPassword(PasswordResetRequest) - Method in class org.molgenis.security.account.AccountController
resetPassword(String) - Method in interface org.molgenis.security.account.AccountService
resetPassword(String) - Method in class org.molgenis.security.account.AccountServiceImpl
resetSecretForUser() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService
resetSecretForUser() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
ResettableOAuth2AuthorizedClientService - Class in org.molgenis.security.oidc: Similar to InMemoryOAuth2AuthorizedClientService but with the capability to reset the authorized clients (e.g.
ResettableOAuth2AuthorizedClientService(ClientRegistrationRepository) - Constructor for class org.molgenis.security.oidc.ResettableOAuth2AuthorizedClientService: Copy of InMemoryOAuth2AuthorizedClientService.InMemoryOAuth2AuthorizedClientService(ClientRegistrationRepository)
resolveArgument(MethodParameter, ModelAndViewContainer, NativeWebRequest, WebDataBinderFactory) - Method in class org.molgenis.security.token.TokenExtractor
RestAuthenticationToken - Class in org.molgenis.security.token: Holds the api token, passed by the client via a custom HTTP header
RestAuthenticationToken(Object, Object, Collection<? extends GrantedAuthority>, String) - Constructor for class org.molgenis.security.token.RestAuthenticationToken
RestAuthenticationToken(String) - Constructor for class org.molgenis.security.token.RestAuthenticationToken
roleHierarchy() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
roleHierarchyAuthoritiesMapper() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
roleHierarchyBean() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
RoleResponse - Class in org.molgenis.security.group
RoleResponse() - Constructor for class org.molgenis.security.group.RoleResponse
roleVoter() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
rollbackTransaction(String) - Method in class org.molgenis.security.acl.AclCacheTransactionListener
runAsAuthenticationProvider() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
RunAsUserTokenFactory - Class in org.molgenis.security.token
RunAsUserTokenFactory(UserDetailsChecker) - Constructor for class org.molgenis.security.token.RunAsUserTokenFactory

S

saveAuthorizedClient(OAuth2AuthorizedClient, Authentication) - Method in class org.molgenis.security.oidc.ResettableOAuth2AuthorizedClientService: Copy of InMemoryOAuth2AuthorizedClientService.saveAuthorizedClient(OAuth2AuthorizedClient, Authentication)
saveSecretForUser(String) - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService: Add generated userSecret to userdata.
saveSecretForUser(String) - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
SECRET - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
SecurityContextRegistry - Interface in org.molgenis.security.permission
SecurityContextRegistryImpl - Class in org.molgenis.security.permission
SessionMetrics - Class in org.molgenis.security.metrics
setAction(String) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setAuthorizationGrantType(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setAuthorizationUri(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setChallenge_ts(String) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setClientAuthenticationMethod(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setClientId(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setClientName(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setClientSecret(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setCode(String) - Method in class org.molgenis.security.twofactor.model.RecoveryCode
setErrorCodes(List<String>) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setFailedLoginAttempts(int) - Method in class org.molgenis.security.twofactor.model.UserSecret
setHostname(String) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setId(String) - Method in class org.molgenis.security.oidc.model.OidcUserMapping
setId(String) - Method in class org.molgenis.security.twofactor.model.RecoveryCode
setId(String) - Method in class org.molgenis.security.twofactor.model.UserSecret
setJwkSetUri(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setLabel(String) - Method in class org.molgenis.security.oidc.model.OidcUserMapping
setLastFailedAuthentication(Instant) - Method in class org.molgenis.security.twofactor.model.UserSecret
setOidcClient(OidcClient) - Method in class org.molgenis.security.oidc.model.OidcUserMapping
setOidcClients(List<OidcClient>) - Method in interface org.molgenis.security.settings.AuthenticationSettings
setOidcClients(List<OidcClient>) - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
setOidcUsername(String) - Method in class org.molgenis.security.oidc.model.OidcUserMapping
setPassword1(String) - Method in class org.molgenis.security.account.ChangePasswordForm
setPassword2(String) - Method in class org.molgenis.security.account.ChangePasswordForm
setRole(String) - Method in class org.molgenis.security.permission.Permission
setScopes(String[]) - Method in class org.molgenis.security.oidc.model.OidcClient
setScore(double) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setSecret(String) - Method in class org.molgenis.security.twofactor.model.UserSecret
setSignUp(boolean) - Method in interface org.molgenis.security.settings.AuthenticationSettings
setSignUp(boolean) - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
setSignUpModeration(boolean) - Method in interface org.molgenis.security.settings.AuthenticationSettings
setSignUpModeration(boolean) - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
setString(String) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setSuccess(boolean) - Method in class org.molgenis.security.captcha.ReCaptchaValidationResponse
setToken(String) - Method in class org.molgenis.security.captcha.ReCaptchaValidationRequest
setTokenUri(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setTwoFactorAuthentication(TwoFactorAuthenticationSetting) - Method in interface org.molgenis.security.settings.AuthenticationSettings
setTwoFactorAuthentication(TwoFactorAuthenticationSetting) - Method in class org.molgenis.security.settings.AuthenticationSettingsImpl
setType(String) - Method in class org.molgenis.security.permission.Permission
setUser(User) - Method in class org.molgenis.security.oidc.model.OidcUserMapping
setUserId(String) - Method in class org.molgenis.security.twofactor.model.RecoveryCode
setUserId(String) - Method in class org.molgenis.security.twofactor.model.UserSecret
setUserInfoUri(String) - Method in class org.molgenis.security.oidc.model.OidcClient
setUsernameAttributeName(String) - Method in class org.molgenis.security.oidc.model.OidcClient
supports(Class<?>) - Method in class org.molgenis.security.token.TokenAuthenticationProvider
supports(Class<?>) - Method in class org.molgenis.security.twofactor.auth.RecoveryAuthenticationProviderImpl
supports(Class<?>) - Method in class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationProviderImpl
supportsParameter(MethodParameter) - Method in class org.molgenis.security.token.TokenExtractor

T

TOKEN_HEADER - Static variable in class org.molgenis.security.token.TokenExtractor
TOKEN_PARAMETER - Static variable in class org.molgenis.security.token.TokenExtractor
tokenAuthenticationFilter() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
TokenAuthenticationFilter - Class in org.molgenis.security.token: Servlet filter that checks the httprequest for a molgenis security token and if valid logs the user in, else returns a 401
TokenAuthenticationFilter(AuthenticationProvider) - Constructor for class org.molgenis.security.token.TokenAuthenticationFilter
tokenAuthenticationProvider() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
TokenAuthenticationProvider - Class in org.molgenis.security.token: AuthenticationProvider that uses the TokenService and expects a RestAuthenticationToken
TokenAuthenticationProvider(TokenService, UserDetailsChecker) - Constructor for class org.molgenis.security.token.TokenAuthenticationProvider
TokenExtractor - Class in org.molgenis.security.token: Gets the molgenis authentication token from a HttpServletRequest
TokenExtractor() - Constructor for class org.molgenis.security.token.TokenExtractor
TokenGenerator - Class in org.molgenis.security.token: Generates a secure token
TokenGenerator() - Constructor for class org.molgenis.security.token.TokenGenerator
TokenParam - Annotation Type in org.molgenis.security.token: Annotation that you can use to bind a String parameter in a handler method to the molgenis token in the request.
tokenService() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
TooManyLoginAttemptsException - Exception in org.molgenis.security.twofactor.exceptions
TooManyLoginAttemptsException(String) - Constructor for exception org.molgenis.security.twofactor.exceptions.TooManyLoginAttemptsException
toString() - Method in class org.molgenis.security.permission.Permission
toUser(OidcUser, OidcUserRequest) - Method in interface org.molgenis.security.oidc.OidcUserMapper: Get User or create one is none exist.
toUser(OidcUser, OidcUserRequest) - Method in class org.molgenis.security.oidc.OidcUserMapperImpl
TransactionalJdbcMutableAclService - Class in org.molgenis.security.acl: Transactional JdbcMutableAclService.
TransactionalJdbcMutableAclService(DataSource, LookupStrategy, AclCache) - Constructor for class org.molgenis.security.acl.TransactionalJdbcMutableAclService
tryVerificationCode(String, String) - Method in interface org.molgenis.security.twofactor.service.OtpService: Use TOTP algorithm to verify validity of secret and verification code.
tryVerificationCode(String, String) - Method in class org.molgenis.security.twofactor.service.OtpServiceImpl
TWO_FACTOR_ACTIVATION_URI - Static variable in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
TWO_FACTOR_CONFIGURED_URI - Static variable in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
TwoFactorAuthenticationController - Class in org.molgenis.security.twofactor
TwoFactorAuthenticationController(TwoFactorAuthenticationProvider, TwoFactorAuthenticationService, RecoveryAuthenticationProvider, OtpService) - Constructor for class org.molgenis.security.twofactor.TwoFactorAuthenticationController
twoFactorAuthenticationFilter() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
TwoFactorAuthenticationFilter - Class in org.molgenis.security.twofactor.auth
TwoFactorAuthenticationFilter(AuthenticationSettings, TwoFactorAuthenticationService, RedirectStrategy, UserAccountService) - Constructor for class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationFilter
twoFactorAuthenticationProvider() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
TwoFactorAuthenticationProvider - Interface in org.molgenis.security.twofactor.auth: Marker interface for TwoFactorAuthenticationProvider when you do not implement is this way you get error messages like:
TwoFactorAuthenticationProviderImpl - Class in org.molgenis.security.twofactor.auth: AuthenticationProvider that uses the TwoFactorAuthenticationService and expects a TwoFactorAuthenticationToken
TwoFactorAuthenticationProviderImpl(TwoFactorAuthenticationService, OtpService, RecoveryService) - Constructor for class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationProviderImpl
TwoFactorAuthenticationService - Interface in org.molgenis.security.twofactor.service: Service to use in TwoFactorAuthenticationFilter and TwoFactorAuthenticationController
TwoFactorAuthenticationServiceImpl - Class in org.molgenis.security.twofactor.service
TwoFactorAuthenticationServiceImpl(OtpService, DataService, UserService, IdGenerator, UserSecretFactory) - Constructor for class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
TwoFactorAuthenticationSetting - Enum in org.molgenis.security.twofactor.auth: You can have tw-factor-authentication in three different states in your system DISABLED: two-factor-authentication is disabled for all users ENABLED: two-factor-authentication is enabled.
TwoFactorAuthenticationToken - Class in org.molgenis.security.twofactor.auth: Holds the api token, passed by the client via a custom HTTP header
TwoFactorAuthenticationToken(Object, Object, Collection<? extends GrantedAuthority>, String, String) - Constructor for class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationToken
TwoFactorAuthenticationToken(String, String) - Constructor for class org.molgenis.security.twofactor.auth.TwoFactorAuthenticationToken

U

updateAcl(MutableAcl) - Method in class org.molgenis.security.acl.TransactionalJdbcMutableAclService
updateAuthentication(Authentication, List<GrantedAuthority>) - Method in interface org.molgenis.security.permission.AuthenticationAuthoritiesUpdater: Update an Authentication with new authorities.
updateAuthentication(Authentication, List<GrantedAuthority>) - Method in class org.molgenis.security.permission.AuthenticationAuthoritiesUpdaterImpl
updateCurrentUser(User) - Method in interface org.molgenis.security.user.UserAccountService: Update the currently logged in user
updateCurrentUser(User) - Method in class org.molgenis.security.user.UserAccountServiceImpl
updateGroupMember(String) - Static method in class org.molgenis.security.group.UpdateGroupMemberCommand
UpdateGroupMemberCommand - Class in org.molgenis.security.group
UpdateGroupMemberCommand() - Constructor for class org.molgenis.security.group.UpdateGroupMemberCommand
updateMember(String, String, UpdateGroupMemberCommand) - Method in class org.molgenis.security.group.GroupRestController
URI - Static variable in class org.molgenis.security.account.AccountController
URI - Static variable in class org.molgenis.security.login.MolgenisLoginController
URI - Static variable in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
UriConstants - Class in org.molgenis.security: URI constants used in security context
USER - Static variable in class org.molgenis.security.group.GroupRestController
USER - Static variable in class org.molgenis.security.oidc.model.OidcUserMappingMetadata
USER_ID - Static variable in class org.molgenis.security.twofactor.model.RecoveryCodeMetadata
USER_ID - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
USER_SECRET - Static variable in class org.molgenis.security.twofactor.model.UserSecretMetaData
UserAccountService - Interface in org.molgenis.security.user: Manage account of the current user
UserAccountServiceImpl - Class in org.molgenis.security.user
UserAccountServiceImpl() - Constructor for class org.molgenis.security.user.UserAccountServiceImpl
userDetailsChecker() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
userDetailsService() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
UserDetailsService - Class in org.molgenis.security.user
UserDetailsService(DataService, GrantedAuthoritiesMapper) - Constructor for class org.molgenis.security.user.UserDetailsService
userDetailsServiceBean() - Method in class org.molgenis.security.MolgenisWebAppSecurityConfig
useRecoveryCode(String) - Method in interface org.molgenis.security.twofactor.service.RecoveryService: Checks if a recovery code is valid for the current user and throws an exception if it is not.
useRecoveryCode(String) - Method in class org.molgenis.security.twofactor.service.RecoveryServiceImpl
userIsBlocked() - Method in interface org.molgenis.security.twofactor.service.TwoFactorAuthenticationService
userIsBlocked() - Method in class org.molgenis.security.twofactor.service.TwoFactorAuthenticationServiceImpl
UsernameAlreadyExistsException - Exception in org.molgenis.security.account: Deprecated.
use class that extends from CodedRuntimeException
UsernameAlreadyExistsException() - Constructor for exception org.molgenis.security.account.UsernameAlreadyExistsException: Deprecated.
UsernameAlreadyExistsException(String) - Constructor for exception org.molgenis.security.account.UsernameAlreadyExistsException: Deprecated.
UsernameAlreadyExistsException(Throwable) - Constructor for exception org.molgenis.security.account.UsernameAlreadyExistsException: Deprecated.
UsernameAlreadyExistsException(String, Throwable) - Constructor for exception org.molgenis.security.account.UsernameAlreadyExistsException: Deprecated.
UsernameAlreadyExistsException(String, Throwable, boolean, boolean) - Constructor for exception org.molgenis.security.account.UsernameAlreadyExistsException: Deprecated.
UserPermissionEvaluatorImpl - Class in org.molgenis.security.permission
UserResponse - Class in org.molgenis.security.group
UserResponse() - Constructor for class org.molgenis.security.group.UserResponse
UserSecret - Class in org.molgenis.security.twofactor.model
UserSecret(Entity) - Constructor for class org.molgenis.security.twofactor.model.UserSecret
UserSecret(EntityType) - Constructor for class org.molgenis.security.twofactor.model.UserSecret
UserSecret(String, EntityType) - Constructor for class org.molgenis.security.twofactor.model.UserSecret
UserSecretFactory - Class in org.molgenis.security.twofactor.model
UserSecretMetaData - Class in org.molgenis.security.twofactor.model: User secret key for 2 factor authentication
UserSecretMetaData(SecurityPackage) - Constructor for class org.molgenis.security.twofactor.model.UserSecretMetaData

V

validate(String) - Method in class org.molgenis.security.captcha.ReCaptchaService
validate(Model, String) - Method in class org.molgenis.security.twofactor.TwoFactorAuthenticationController
validateCaptcha(ReCaptchaValidationRequest) - Method in class org.molgenis.security.captcha.ReCaptchaController
validateCurrentUserPassword(String) - Method in interface org.molgenis.security.user.UserAccountService: Validates the password of the current logged in user
validateCurrentUserPassword(String) - Method in class org.molgenis.security.user.UserAccountServiceImpl
valueOf(String) - Static method in enum org.molgenis.security.twofactor.auth.TwoFactorAuthenticationSetting: Returns the enum constant of this type with the specified name.
values() - Static method in enum org.molgenis.security.twofactor.auth.TwoFactorAuthenticationSetting: Returns an array containing the constants of this enum type, in the order they are declared.

W

WebAppSecurityInitializer - Class in org.molgenis.security
WebAppSecurityInitializer() - Constructor for class org.molgenis.security.WebAppSecurityInitializer

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