org.molgenis.genotype

Class Allele

java.lang.Object

org.molgenis.genotype.Allele

All Implemented Interfaces:

Comparable<Allele>

public final class Allele
extends Object
implements Comparable<Allele>

Field Summary

Fields

Modifier and Type	Field and Description
static Allele	A
static Allele	C
static Allele	G
static Allele	T
static Allele	ZERO

Method Summary

Modifier and Type	Method and Description
int	compareTo(Allele other)
static Allele	create(char alleleChar)
static Allele	create(String alleleString)
boolean	equals(Object obj)
char	getAlleleAsSnp()
String	getAlleleAsString()
Allele	getComplement()
int	hashCode()
boolean	isSnpAllele()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

A

public static final Allele A

C

public static final Allele C

G

public static final Allele G

T

public static final Allele T

ZERO

public static final Allele ZERO

Method Detail

isSnpAllele

public boolean isSnpAllele()

getAlleleAsString

public String getAlleleAsString()

Returns:

the allele

getAlleleAsSnp

public char getAlleleAsSnp()

Returns:

the snpAllele

getComplement

public Allele getComplement()

create

public static Allele create(String alleleString)

create

public static Allele create(char alleleChar)

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

toString

public String toString()

Overrides:

toString in class Object

compareTo

public int compareTo(Allele other)

Specified by:

compareTo in interface Comparable<Allele>