org.molgenis.vcf

Class VcfWriterFactory

java.lang.Object

org.molgenis.vcf.VcfWriterFactory

public class VcfWriterFactory
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	VcfWriterFactory.Format
static class	VcfWriterFactory.Version

Constructor Summary

Constructors

Constructor and Description
VcfWriterFactory()

Method Summary

Modifier and Type	Method and Description
VcfWriter	create(File file, VcfMeta vcfMeta) Returns a Vcf42Writer to write gzipped or uncompressed content to file based on the file name extension.
VcfWriter	create(File file, VcfMeta vcfMeta, VcfWriterFactory.Format format)
VcfWriter	create(File file, VcfMeta vcfMeta, VcfWriterFactory.Format format, VcfWriterFactory.Version version)
VcfWriter	create(OutputStream outputStream, VcfMeta vcfMeta)
VcfWriter	create(OutputStream outputStream, VcfMeta vcfMeta, VcfWriterFactory.Format format)
VcfWriter	create(OutputStream outputStream, VcfMeta vcfMeta, VcfWriterFactory.Format format, VcfWriterFactory.Version version)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VcfWriterFactory

public VcfWriterFactory()

Method Detail

create

public VcfWriter create(File file,
                        VcfMeta vcfMeta)
                 throws FileNotFoundException

Returns a Vcf42Writer to write gzipped or uncompressed content to file based on the file name extension.

Throws:

FileNotFoundException

create

public VcfWriter create(File file,
                        VcfMeta vcfMeta,
                        VcfWriterFactory.Format format)
                 throws FileNotFoundException

Throws:

FileNotFoundException

create

public VcfWriter create(File file,
                        VcfMeta vcfMeta,
                        VcfWriterFactory.Format format,
                        VcfWriterFactory.Version version)
                 throws FileNotFoundException

Throws:

FileNotFoundException

create

public VcfWriter create(OutputStream outputStream,
                        VcfMeta vcfMeta)

create

public VcfWriter create(OutputStream outputStream,
                        VcfMeta vcfMeta,
                        VcfWriterFactory.Format format)

create

public VcfWriter create(OutputStream outputStream,
                        VcfMeta vcfMeta,
                        VcfWriterFactory.Format format,
                        VcfWriterFactory.Version version)