Uses of Class
org.molgenis.vcf.VcfRecord

Packages that use VcfRecord

Package	Description
org.molgenis.vcf
org.molgenis.vcf.v4_2

Uses of VcfRecord in org.molgenis.vcf

Methods in org.molgenis.vcf that return VcfRecord

Modifier and Type	Method and Description
VcfRecord	VcfRecord.createClone()

Methods in org.molgenis.vcf that return types with arguments of type VcfRecord

Modifier and Type	Method and Description
Iterator<VcfRecord>	VcfRecordReader.iterator()
Iterator<VcfRecord>	VcfReader.iterator()

Methods in org.molgenis.vcf with parameters of type VcfRecord

Modifier and Type	Method and Description
static String	VcfRecordUtils.getAlt(VcfRecord vcfRecord)
static String	VcfRecordUtils.getAlt(VcfRecord vcfRecord, int i)
static int	VcfRecordUtils.getAltAlleleIndex(VcfRecord vcfRecord, String alt)
static Double[]	VcfRecordUtils.getAltAlleleOrderedDoubleField(VcfRecord vcfRecord, String fieldName)
static int	VcfRecordUtils.getAltIndex(VcfRecord vcfRecord, String alt)
static String[]	VcfRecordUtils.getAlts(VcfRecord vcfRecord)
static String[]	VcfRecordUtils.getAltsAsStringArray(VcfRecord vcfRecord)
static String	VcfRecordUtils.getAltString(VcfRecord vcfRecord)
static String	VcfRecordUtils.getChrPosRefAlt(VcfRecord vcfRecord)
static String	VcfRecordUtils.getId(VcfRecord vcfRecord)
static Optional<VcfInfo>	VcfRecordUtils.getInformation(String key, VcfRecord vcfRecord)
static String	VcfRecordUtils.getRef(VcfRecord vcfRecord)
static String	VcfRecordUtils.getSampleFieldValue(VcfRecord vcfEntity, VcfSample sample, String field)
void	VcfWriter.write(VcfRecord vcfRecord)

Constructors in org.molgenis.vcf with parameters of type VcfRecord

Constructor and Description
VcfSample(VcfRecord vcfRecord)
VcfSample(VcfRecord vcfRecord, String[] tokens)

Uses of VcfRecord in org.molgenis.vcf.v4_2

Methods in org.molgenis.vcf.v4_2 with parameters of type VcfRecord

Modifier and Type	Method and Description
void	Vcf42Writer.write(VcfRecord vcfRecord)