Package org.molgenis.vibe.cli

Enum RunMode

java.lang.Object

java.lang.Enum<RunMode>

org.molgenis.vibe.cli.RunMode

All Implemented Interfaces:

Serializable, Comparable<RunMode>

public enum RunMode
extends Enum<RunMode>

Describes what the application should do.

Enum Constant Summary

Enum Constants

Enum Constant	Description
GENES_FOR_PHENOTYPES
GENES_FOR_PHENOTYPES_WITH_ASSOCIATED_PHENOTYPES
HELP
VERSION

Method Summary

Modifier and Type	Method	Description
protected String	getDescription()
void	run(VibeOptions vibeOptions)
protected abstract void	runMode(VibeOptions vibeOptions, org.apache.jena.ext.com.google.common.base.Stopwatch stopwatch)
static RunMode	valueOf(String name)	Returns the enum constant of this type with the specified name.
static RunMode[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

HELP

public static final RunMode HELP

VERSION

public static final RunMode VERSION

GENES_FOR_PHENOTYPES_WITH_ASSOCIATED_PHENOTYPES

public static final RunMode GENES_FOR_PHENOTYPES_WITH_ASSOCIATED_PHENOTYPES

GENES_FOR_PHENOTYPES

public static final RunMode GENES_FOR_PHENOTYPES

Method Detail

values

public static RunMode[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (RunMode c : RunMode.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static RunMode valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getDescription

protected String getDescription()

run

public final void run(VibeOptions vibeOptions)
               throws Exception

Throws:

Exception

runMode

protected abstract void runMode(VibeOptions vibeOptions,
                                org.apache.jena.ext.com.google.common.base.Stopwatch stopwatch)
                         throws Exception

Throws:

Exception