Uses of Interface
org.molgenis.vibe.cli.io.output.target.OutputWriter

Packages that use OutputWriter

Package	Description
org.molgenis.vibe.cli.io.options_digestion
org.molgenis.vibe.cli.io.output.format
org.molgenis.vibe.cli.io.output.format.gene_prioritized
org.molgenis.vibe.cli.io.output.target

Uses of OutputWriter in org.molgenis.vibe.cli.io.options_digestion

Methods in org.molgenis.vibe.cli.io.options_digestion that return OutputWriter

Modifier and Type	Method	Description
OutputWriter	VibeOptions.getOutputWriter()

Uses of OutputWriter in org.molgenis.vibe.cli.io.output.format

Methods in org.molgenis.vibe.cli.io.output.format that return OutputWriter

Modifier and Type	Method	Description
protected OutputWriter	OutputFormatWriter.getOutputWriter()

Methods in org.molgenis.vibe.cli.io.output.format with parameters of type OutputWriter

Modifier and Type	Method	Description
OutputFormatWriter	PrioritizedOutputFormatWriterFactory.create(OutputWriter outputWriter, GeneDiseaseCollection geneDiseaseCollection, List<T> priority)

Constructors in org.molgenis.vibe.cli.io.output.format with parameters of type OutputWriter

Constructor	Description
OutputFormatWriter(OutputWriter outputWriter)
PrioritizedOutputFormatWriter(OutputWriter outputWriter, List<T> priority)

Uses of OutputWriter in org.molgenis.vibe.cli.io.output.format.gene_prioritized

Constructors in org.molgenis.vibe.cli.io.output.format.gene_prioritized with parameters of type OutputWriter

Constructor	Description
OrderedGenesOutputFormatWriter(OutputWriter writer, List<Gene> priority, ValuesSeparator separator)
ResultsPerGeneSeparatedValuesOutputFormatWriter(OutputWriter writer, List<Gene> priority, GeneDiseaseCollection collection, ValuesSeparator primarySeparator, ValuesSeparator keyValuePairSeparator, ValuesSeparator keyValueSeparator, ValuesSeparator valuesSeparator)
ResultsPerGeneSeparatedValuesOutputFormatWriterUsingIds(OutputWriter writer, List<Gene> priority, GeneDiseaseCollection collection, ValuesSeparator primarySeparator, ValuesSeparator keyValuePairSeparator, ValuesSeparator keyValueSeparator, ValuesSeparator valuesSeparator)
ResultsPerGeneSeparatedValuesOutputFormatWriterUsingUris(OutputWriter writer, List<Gene> priority, GeneDiseaseCollection collection, ValuesSeparator primarySeparator, ValuesSeparator keyValuePairSeparator, ValuesSeparator keyValueSeparator, ValuesSeparator valuesSeparator)

Uses of OutputWriter in org.molgenis.vibe.cli.io.output.target

Classes in org.molgenis.vibe.cli.io.output.target that implement OutputWriter

Modifier and Type	Class	Description
class	FileOutputWriter	Writer for writing output to a file.
class	StdoutOutputWriter	Writer for writing output to stdout.