Package org.molgenis.vibe.core.tdb_processing

Class GenesForPhenotypeRetriever

java.lang.Object

org.molgenis.vibe.core.tdb_processing.DisgenetRdfDataRetriever

org.molgenis.vibe.core.tdb_processing.GenesForPhenotypeRetriever

public class GenesForPhenotypeRetriever
extends DisgenetRdfDataRetriever

Retrieves all required information for further processing regarding the genes belonging to a given phenotype.

Constructor Summary

Constructors

Constructor	Description
GenesForPhenotypeRetriever(ModelReader modelReader, Set<Phenotype> phenotypes)

Method Summary

Modifier and Type	Method	Description
GeneDiseaseCollection	getGeneDiseaseCollection()
void	run()

Methods inherited from class org.molgenis.vibe.core.tdb_processing.DisgenetRdfDataRetriever

getModelReader, getSources, retrieveSources

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GenesForPhenotypeRetriever

public GenesForPhenotypeRetriever(ModelReader modelReader,
                                  Set<Phenotype> phenotypes)

Method Detail

getGeneDiseaseCollection

public GeneDiseaseCollection getGeneDiseaseCollection()

run

public void run()

Specified by:

run in class DisgenetRdfDataRetriever