Package org.molgenis.vibe.core.formats

Class PubmedEvidence

java.lang.Object

org.molgenis.vibe.core.formats.Entity

org.molgenis.vibe.core.formats.PubmedEvidence

All Implemented Interfaces:

Comparable<Entity>, AllFieldsEquals, EntityWithIntId, ResourceUri

public class PubmedEvidence
extends Entity
implements EntityWithIntId

Field Summary

Fields

Modifier and Type	Field	Description
static String	ID_PREFIX
static Comparator<PubmedEvidence>	RELEASE_YEAR_COMPARATOR	Sorts PubmedEvidence first on getReleaseYear() (most recent first) and then by ID (as int, lowest to highest).

Constructor Summary

Constructors

Constructor	Description
PubmedEvidence(String id, int year)
PubmedEvidence(URI uri, int year)

Method Summary

Modifier and Type	Method	Description
boolean	allFieldsEquals(Object o)
int	compareTo(Entity o)
int	getIdInt()
protected String	getIdPrefix()	The entity prefix.
protected String	getIdRegex()	A regular expression an input String should adhere to when deriving the Entity from it.
protected int	getRegexIdGroup()	The group within the regular expression the actual Entity.id is stored in.
int	getReleaseYear()
protected String	getUriPrefix()	The String describing the URI prefix it should match with.
String	toString()	While uniqueness is based on the Entity.id (as each Entity.id should only occur once and data belonging to it should be consistent), Entity.toString() can be used for testing whether data retrieval from external sources yielded the expected results.

Methods inherited from class org.molgenis.vibe.core.formats.Entity

equals, getFormattedId, getId, getName, getUri, hashCode, retrieveIdFromString, setName

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

ID_PREFIX

public static final String ID_PREFIX

See Also:

Constant Field Values

RELEASE_YEAR_COMPARATOR

public static final Comparator<PubmedEvidence> RELEASE_YEAR_COMPARATOR

Sorts PubmedEvidence first on getReleaseYear() (most recent first) and then by ID (as int, lowest to highest).

Constructor Detail

PubmedEvidence

public PubmedEvidence(String id,
                      int year)

PubmedEvidence

public PubmedEvidence(URI uri,
                      int year)

Method Detail

getIdInt

public int getIdInt()

Specified by:

getIdInt in interface EntityWithIntId

getIdPrefix

protected String getIdPrefix()

Description copied from class: Entity

The entity prefix.

Specified by:

getIdPrefix in class Entity

Returns:

a String containing the prefix.

getIdRegex

protected String getIdRegex()

Description copied from class: Entity

A regular expression an input String should adhere to when deriving the Entity from it.

Specified by:

getIdRegex in class Entity

Returns:

getRegexIdGroup

protected int getRegexIdGroup()

Description copied from class: Entity

The group within the regular expression the actual Entity.id is stored in.

Specified by:

getRegexIdGroup in class Entity

Returns:

getUriPrefix

protected String getUriPrefix()

Description copied from class: Entity

The String describing the URI prefix it should match with.

Specified by:

getUriPrefix in class Entity

Returns:

getReleaseYear

public int getReleaseYear()

compareTo

public int compareTo(Entity o)

Specified by:

compareTo in interface Comparable<Entity>

Overrides:

compareTo in class Entity

allFieldsEquals

public boolean allFieldsEquals(Object o)

Specified by:

allFieldsEquals in interface AllFieldsEquals

Overrides:

allFieldsEquals in class Entity

toString

public String toString()

Description copied from class: Entity

While uniqueness is based on the Entity.id (as each Entity.id should only occur once and data belonging to it should be consistent), Entity.toString() can be used for testing whether data retrieval from external sources yielded the expected results.

Overrides:

toString in class Entity