Module org.monarchinitiative.hpotextmining.core

Package org.monarchinitiative.hpotextmining.core.miners.scigraph

Class SciGraphResult

java.lang.Object

org.monarchinitiative.hpotextmining.core.miners.scigraph.SciGraphResult

All Implemented Interfaces:

Comparable<SciGraphResult>

public class SciGraphResult
extends Object
implements Comparable<SciGraphResult>

JSON Class representation of Monarch SciGraph text mining results.

Since:

0.2.2

Version:

0.1.0

Author:

Aaron Zhang

Constructor Summary

Constructors

Constructor	Description
SciGraphResult(SciGraphToken token, int start, int end)

Method Summary

Modifier and Type	Method	Description
int	compareTo(SciGraphResult o)	Compare by the start position
boolean	equals(Object other)
int	getEnd()
int	getStart()
SciGraphToken	getToken()
int	hashCode()
void	setEnd(int end)
void	setStart(int start)
void	setToken(SciGraphToken token)
static BiolarkResult	toBiolarkResult(SciGraphResult m, String query)	Convert to BiolarkResult.

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Details

SciGraphResult

public SciGraphResult(SciGraphToken token,
 int start,
 int end)

Method Details

toBiolarkResult

public static BiolarkResult toBiolarkResult(SciGraphResult m,
 String query)

Convert to BiolarkResult.

Parameters:

m - SciGraphResult

query - String with the query text

Returns:

BiolarkResult representing the m instance

getToken

public SciGraphToken getToken()

setToken

public void setToken(SciGraphToken token)

getStart

public int getStart()

setStart

public void setStart(int start)

getEnd

public int getEnd()

setEnd

public void setEnd(int end)

equals

public boolean equals(Object other)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

compareTo

public int compareTo(SciGraphResult o)

Compare by the start position

Specified by:

compareTo in interface Comparable<SciGraphResult>

Parameters:

o - other SciGraphResult

Returns:

result as specified by Comparable