org.monarchinitiative.hpotextmining.gui.controller

Class Present

java.lang.Object

org.monarchinitiative.hpotextmining.gui.controller.Present

public class Present
extends Object

This class is responsible for displaying the terms of performed text-mining analysis.

The controller accepts response from the server performing text-mining analysis in JSON format and the analyzed text. The analyzed text with highlighted term-containing regions is presented to the user. Tooltips containing the HPO term id and name are also created for the highlighted regions. After clicking on the highlighted region, corresponding term is selected in the ontology TreeView (left part of the main window).

Identified YES and NOT HPO terms are displayed on the right side of the screen as a set of checkboxes. The user/biocurator is supposed to review the analyzed text and select those checkboxes that have been identified correctly.

Selected terms must be approved with Add selected terms button in order to add them into the model.

Since:

0.1

Version:

0.1.0

Author:

Daniel Danis, Aaron Zhang

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	Present.JavaBridge This class is the bridge between JavaScript run in the webView and Java code.

Method Summary

Modifier and Type	Method and Description
void	initialize()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

initialize

public void initialize()