org.oncoblocks.centromere.core.dataimport.pipeline

Class JsonJobFileParser

java.lang.Object

org.oncoblocks.centromere.core.dataimport.pipeline.JsonJobFileParser

All Implemented Interfaces:

JobFileParser

public class JsonJobFileParser
extends Object
implements JobFileParser

Converts a JSON-formatted job description file and returns an ImportJob object. It is expected that the complete JSON object will map to a single job object, via simple object mapping with a Jackson ObjectMapper.

Author:

woemler

Constructor Summary

Constructors

Constructor and Description
JsonJobFileParser()
JsonJobFileParser(com.fasterxml.jackson.databind.ObjectMapper objectMapper)

Method Summary

Modifier and Type	Method and Description
ImportJob	parseJobFile(String inputPath) JobFileParser.parseJobFile(String)
void	setObjectMapper(com.fasterxml.jackson.databind.ObjectMapper objectMapper)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

JsonJobFileParser

public JsonJobFileParser()

JsonJobFileParser

public JsonJobFileParser(com.fasterxml.jackson.databind.ObjectMapper objectMapper)

Method Detail

parseJobFile

public ImportJob parseJobFile(String inputPath)
                       throws DataImportException

JobFileParser.parseJobFile(String)

Specified by:

parseJobFile in interface JobFileParser

Parameters:

inputPath - Path to the job description file.

Returns:

Throws:

DataImportException

setObjectMapper

public void setObjectMapper(com.fasterxml.jackson.databind.ObjectMapper objectMapper)