Package org.openforis.collect.manager.speciesimport

Class SpeciesCSVReader.SpeciesCSVLineParser

java.lang.Object

org.openforis.collect.io.metadata.parsing.LineParser<SpeciesLine>

org.openforis.collect.io.metadata.parsing.CSVLineParser<SpeciesLine>

org.openforis.collect.io.metadata.parsing.CSVReferenceDataLineParser<SpeciesLine>

org.openforis.collect.manager.speciesimport.SpeciesCSVReader.SpeciesCSVLineParser

Enclosing class:

SpeciesCSVReader

public static class SpeciesCSVReader.SpeciesCSVLineParser
extends CSVReferenceDataLineParser<SpeciesLine>

Field Summary

Fields

Modifier and Type	Field	Description
static final String	GENUS_SUFFIX
static final String	UNEXPECTED_SYNONYM_MESSAGE_KEY

Fields inherited from class org.openforis.collect.io.metadata.parsing.CSVLineParser

csvLine, reader

Fields inherited from class org.openforis.collect.io.metadata.parsing.LineParser

lineNumber

Method Summary

Modifier and Type	Method	Description
protected ParsingError	createFieldParsingError(SpeciesFileColumn column, String fieldName, String value)
static SpeciesCSVReader.SpeciesCSVLineParser	createInstance(SpeciesCSVReader reader, org.openforis.commons.io.csv.CsvLine line, List<String> infoColumnNames)
protected String	extractCode(boolean required)
protected String	extractFamilyName()
protected Map<String,List<String>>	extractLanguageToVernacularNames()
protected String	extractRawScientificName()
protected Integer	extractTaxonId(boolean required)
protected List<String>	extractVernacularNames(String colName)
protected org.openforis.collect.manager.speciesimport.SpeciesCSVReader.VernacularLanguagesMap	extractVernacularNamesFromColumns()
SpeciesLine	parse()
protected void	throwEmptyColumnParsingException(SpeciesFileColumn column)

Methods inherited from class org.openforis.collect.io.metadata.parsing.CSVReferenceDataLineParser

parseInfos

Methods inherited from class org.openforis.collect.io.metadata.parsing.CSVLineParser

getColumnValue, getColumnValue, getReader, trimValue

Methods inherited from class org.openforis.collect.io.metadata.parsing.LineParser

createFieldParsingError, getLineNumber, newLineInstance, throwEmptyColumnParsingException

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

GENUS_SUFFIX

public static final String GENUS_SUFFIX

See Also:

• Constant Field Values

UNEXPECTED_SYNONYM_MESSAGE_KEY

public static final String UNEXPECTED_SYNONYM_MESSAGE_KEY

See Also:

• Constant Field Values

Method Details

createInstance

public static SpeciesCSVReader.SpeciesCSVLineParser createInstance(SpeciesCSVReader reader,
 org.openforis.commons.io.csv.CsvLine line,
 List<String> infoColumnNames)

parse

public SpeciesLine parse()
                  throws ParsingException

Overrides:

parse in class CSVReferenceDataLineParser<SpeciesLine>

Throws:

ParsingException

extractTaxonId

protected Integer extractTaxonId(boolean required)
                          throws ParsingException

Throws:

ParsingException

extractCode

protected String extractCode(boolean required)
                      throws ParsingException

Throws:

ParsingException

extractFamilyName

protected String extractFamilyName()
                            throws ParsingException

Throws:

ParsingException

extractRawScientificName

protected String extractRawScientificName()
                                   throws ParsingException

Throws:

ParsingException

extractLanguageToVernacularNames

protected Map<String,List<String>> extractLanguageToVernacularNames()
                                                             throws ParsingException

Throws:

ParsingException

extractVernacularNamesFromColumns

protected org.openforis.collect.manager.speciesimport.SpeciesCSVReader.VernacularLanguagesMap extractVernacularNamesFromColumns()
                                                                                                                         throws ParsingException

Throws:

ParsingException

extractVernacularNames

protected List<String> extractVernacularNames(String colName)
                                       throws ParsingException

Throws:

ParsingException

createFieldParsingError

protected ParsingError createFieldParsingError(SpeciesFileColumn column,
 String fieldName,
 String value)

throwEmptyColumnParsingException

protected void throwEmptyColumnParsingException(SpeciesFileColumn column)
                                         throws ParsingException

Throws:

ParsingException